Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001576 |
Symbol | |
ID | 8559889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1780515 |
End bp | 1781087 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646409244 |
Product | protocatechuate 3,4-dioxygenase beta chain |
Protein accession | YP_003288722 |
Protein GI | 262396869 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGTC GACACTTCTT AGCTTTATGG TCGCTAATAT TTGCGCCTTC GCTAAAATCC GCTAGCCCAA TGAAGCCGAC ACCGCCTCAA ACGGAAGGGC CATTTTATCC CGTGGTTCCA GTGCCACTTC GTCAAAATTT GATTTTGCAG TCGAAAGGTC TTATTGGTGA GCCCATTTTT CTTCAGGGTA AGGTAATGGA TACAGCAGGA AACCCATTGT CTGAAATGAA AATAGAAATA TGGCAATGTG ATGGACAAGG CATCTATGAT CACCCGAATC AACCTAACAA TAATAAGTTT GATCCTCACT TTGCAGGCTT TGGTGCAGTT TTAACTGGCG AAGATGGGAA TTACCTTTTT CAAACGTTAT TTCCGGTTCC ATATAGCTCT CGACCTCCCC ACATCCACGT AAAATTGTGG CGTGGAGAGA AAGAGCTGTT AACGACTCAG CTTTATTTGA AAGGGCGAAC TGGTAACGAG TGGTGGGGCG GAAAAGCCCG TGATTATTTG CAGTTTGAGC CTGTCAACAT TGATGGTCGA GTCGTCGGTG AGTTCAATTT TGTGCTCGCT TAG
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Protein sequence | MERRHFLALW SLIFAPSLKS ASPMKPTPPQ TEGPFYPVVP VPLRQNLILQ SKGLIGEPIF LQGKVMDTAG NPLSEMKIEI WQCDGQGIYD HPNQPNNNKF DPHFAGFGAV LTGEDGNYLF QTLFPVPYSS RPPHIHVKLW RGEKELLTTQ LYLKGRTGNE WWGGKARDYL QFEPVNIDGR VVGEFNFVLA
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