| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001550 |
|---|
| Symbol | |
|---|
| ID | 8559863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1753594 |
|---|
| End bp | 1754499 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646409220 |
|---|
| Product | 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_003288698 |
|---|
| Protein GI | 262396845 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCA TCGCATTTAT CGGTTTAGGA AGAATGGGGC ATCCGATGGC GCAAAACCTA
TTAGCGTCTG GATTTAACGT GCAAGTATTC GATGTCGATA GCGAAGCGGC AAAGCAACTT
GCACCTTTTG GTGCGGTGGT GGCGAGCTCT ATCGAGGAAG TCGTGGATGG TGCAAGCACG
GTCATCACGA TGCTACCAGC AGGATCTCAC GTTCGTTCCG TGTATCTTGG CGACTTACAC
GGCGGCGTAG GTGTCCTCAA TCTTGTCTCG CCAAGTACCT TGATGATTGA TTGTTCAACC
ATTGATCCGG ACTCCGCGCG ATTAGTCGCG AATGAAGCGG CAAATAAACG CGTGTTGTTT
GTCGATGCGC CCGTTTCGGG TGGTGTTGCC GGCGCTAAAG CGGCGACATT AACCTTTATT
GTTGGTGGCT CGGATGAAGC GTTTTCTAAA GCCAATGCCA TTTTGCAGTA CATGGGAAAA
AATGTTTTCC ATGCCGGTAA AGCGGGCGAT GGTCAAATGG CGAAAATCTG TAACAACCTT
ATGCTTGGCA TTTTAATGTC CGGTACGTGC GAGGCGCTAA ATCTAGGTAT CGATCATGGG
CTCGATCCCA AAGTGTTATC AAACATCATG CTGCAAAGCT CTGGCCGAAA TTGGGCATTG
GAGCTTTACA ATCCTTGCCC AGGAGTGATG GACAGTGCAC CAGCCAGCAA CGATTACCAA
CCGGGCTTTA TGAGCAAACT CATGTTGAAA GATCTCGGTT TGGGGTTAGA TGCGGCGTTA
CAAACACACT CTTCGGTTCC GATGGGCTCA CTGGCGCGTA ATTTATATTC TTTCCACAAC
GCGAGCGGCC ATGGCGAGCT CGACTTCTCA AGCTTGTTTG AGTTTTACAA GAGTAAGAAG
GGCTAG
|
|---|
| Protein sequence | MSTIAFIGLG RMGHPMAQNL LASGFNVQVF DVDSEAAKQL APFGAVVASS IEEVVDGAST
VITMLPAGSH VRSVYLGDLH GGVGVLNLVS PSTLMIDCST IDPDSARLVA NEAANKRVLF
VDAPVSGGVA GAKAATLTFI VGGSDEAFSK ANAILQYMGK NVFHAGKAGD GQMAKICNNL
MLGILMSGTC EALNLGIDHG LDPKVLSNIM LQSSGRNWAL ELYNPCPGVM DSAPASNDYQ
PGFMSKLMLK DLGLGLDAAL QTHSSVPMGS LARNLYSFHN ASGHGELDFS SLFEFYKSKK
G
|
|---|
| |