| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001532 |
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| Symbol | |
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| ID | 8559845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1732114 |
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| End bp | 1732995 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646409202 |
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| Product | putative ABC transporter periplasmic binding protein |
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| Protein accession | YP_003288680 |
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| Protein GI | 262396827 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.65277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAGC AAATTACTCG CCGCTTGCTG GCCGTTGGTG TACTGCTTTC AAGTTTTCAC
GCATCCGCGG AAATCGTCGT AGGTGGTAAA AACTTTACAG AACAACAGCT TTTAACGGAG
ATCACGTCTC AATATTTAAC CAAAAAAGGC TACGACGTTG ATAAGCGTTC GGGCATGGGC
AGTGCGGTTT TGCGTAAAGC GCAAGAAAAC GGCCAGATTG ATCTTTATTG GGAATACACG
GGCACATCAC TGATCATTTA CAACAAAGTC AAAGACAAGC TCCCAGCAGA GCAAGTGTAT
CAACGCGTTA AGGAACTCGA TGCCAAGAAA GGCCTAGTTT GGCTTAACAC TTCAAAAGCG
AACAACACCT ACGCGCTCGC TATGCGCAGT GACGATGCGA AACAACGTGG CATCTCAACC
TTATCCGACT TCGCCGAGCA AATGCGCCAA GACCCGCCAA TGACCATTGC TTTGAATGCG
GAATTCTATG CACGAAAAGA TGGCTTCCGA CCTTTACAGA AAACCTACAA ATTCAAAGCT
TCACGAGACC AAGTGAAACG CATGGATACT GGGTTAACTT ATGATGCGCT AAAAGGGAAA
GAAGTCGATG CTGCGCTCGT ATTCGCAACA GATGGTCGTA TCAAAGCATT TGGTTTTACC
GTTTTAACGG ATGACAAACA GTTCTTCCCT GATTACGCGA TCACTCCTGT GGTTCGCCAA
GAAACGCTAG ATGCGAACCC AGAGCTTGCC GAGCAAATGA ACGCGCTTTC TGCGGCGATC
GATGGCGATA CGATGTCGAC TTTGAATCAA CAAGTTGATG TGGAGCGACG TTCGATCTCA
GAAGTCGCAA GCCAGTTCCT ATCTGAGCAT AACTTGGGGT AA
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| Protein sequence | MLKQITRRLL AVGVLLSSFH ASAEIVVGGK NFTEQQLLTE ITSQYLTKKG YDVDKRSGMG
SAVLRKAQEN GQIDLYWEYT GTSLIIYNKV KDKLPAEQVY QRVKELDAKK GLVWLNTSKA
NNTYALAMRS DDAKQRGIST LSDFAEQMRQ DPPMTIALNA EFYARKDGFR PLQKTYKFKA
SRDQVKRMDT GLTYDALKGK EVDAALVFAT DGRIKAFGFT VLTDDKQFFP DYAITPVVRQ
ETLDANPELA EQMNALSAAI DGDTMSTLNQ QVDVERRSIS EVASQFLSEH NLG
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