Gene VEA_001525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001525 
Symbol 
ID8559838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1722489 
End bp1724423 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content49% 
IMG OID646409195 
Productcold-shock DEAD-box protein A 
Protein accessionYP_003288673 
Protein GI262396820 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000079582 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATT CTGTTATTCA ATTCAGCGAT TTATCTCTGA ATGATTCTAT CCTTTCTGCT 
CTAGACGGAA TGGGTTTCGT GTCACCAACT CCAATTCAGG CTGCGGCAAT CCCACACCTG
TTGGAAGGTG CTGACGCGCT GGGTAAAGCT CAAACAGGTA CAGGTAAAAC GGCAGCGTTC
TCTCTGCCTC TTCTAAATAA GATCGATCTC AACCAACGTA AACCACAAGC TATCGTTCTT
GCGCCAACGC GTGAGTTAGC GATTCAGGTT GCGGCTGAAA TGAAAAACCT TGGTAAGAAC
ATCAAGGGTC TTAAAGTTTT AGAGATTTAC GGTGGTGCTT CTATCGTAGA TCAGATGCGT
GCTCTTAAGA GCGGTGCACA AGTTATTGTT GGTACTCCAG GTCGTGTACA AGACCTTATC
AACCGTGAAC GTCTACACCT AGATGAAGTA AACACGTTTG TACTAGACGA AGCTGACGAA
ATGCTAAACA TGGGTTTCGT TGATGACGTT ACTGCGATCA TGGAACATGC ACCAGAGTCT
GCTCAACGCG TTCTATTCTC TGCAACAATG CCTCCGATGC TTAAGAAAAT CGTTGAGCGG
TTCCTACGTG AGCCTGTAAT GGTTGACGTT GCTGGTAAGA ACCACACTGT AGACAAAGTT
CAACAGCAGT TCTGGGTAGT GAAGGGTGTA GAGAAAGATG AAGCGATGTC TCGTCTTCTT
GAAACGGAAG AAACTGATGC ATCAATCGTC TTCGTACGTA CTCGTCAAGA CACTGAGCGT
CTAGCTGATT GGCTATCTGC ACGTGGCTTT AAAGCGGCTG CTCTGCACGG TGACATTCCT
CAGTCTCTAC GTGAGCGTAC TGTTGATCAC ATCAAACAAG GTGTTATCGA CATCCTAGTT
GCAACTGACG TTGTGGCACG TGGTCTTGAT GTTCCACGTA TTACGCACGT ATTCAACTAC
GACATCCCAT TCGATGTTGA GTCTTACATC CACCGTATCG GTCGTACTGG CCGTGCTGGA
CGTAAGGGTA AAGCTATCCT TCTAGTTCGC ACTAACCAAA TTCGTATGCT TCGCACTATC
GAGCGTGTAA CTAAGTCATC TATGGAAGAA ATTCAACTTC CTCTACGTGA CCAAGTTGCT
GAAGCTCGTC TAGCTAAACT AGGCGCTGAG CTTGAAGCAG AGAAAGAGCA CAAAGCTCTA
GACAAATTTG CTGAGCTGGT AGAGAAACTA CAAACTTCTC TAGACATCGA CCCAGCAACG
CTTGCTGCTA TGCTTCTTAA GCGCCAGCAA GGTAAACGTC CTCTGTTCTA CATTGGCGAA
GATCCAATGG TTGAAGCGAT TGAGCGTGAT AAGCAACGCC GCAAAGAGCG CCGTGAAGGT
GGTCGTGACG GCGGTCGTAA CTTCAACAAC CAAGATTGGG ATACTTACCA GCTTCAAGTT
GGTCGCGAGC AAGGTGTTCA AGTTAAAGAC ATCGTTGGTG CTCTAGCGAA CGAACTAGGT
CTAGGTAAAG GCTCTATCGG TGCGATCAAA CTAGCACAAG GCCACACATT CGTTCAGTTA
CCAAAAGCAA TGACTTCTGA AGCTGCGGGC AAGCTAAGCA AACTACGCAT CCGTCAACAA
GATGTTGGTG CTGTAGTATG TGACTTCGAT GACTTCCGAG AGTCTCGTGG TGGTCGCCGT
GACGGTGGTC GTCGCGATGG CGGTCGTCGT GATGGCGGCG GTTACCGTGG CAACCGCGAA
GGCGGCAACC GTGGTGGTGA TCGTCGTGAA GGCGGTCGTC GCGAAGGTGG CTTCCGTGGT
AACCGTGACG GCAACCGCGA TGGTAACCGT GAAGGTGGCG AACGTCGCTT CGATCGTAAC
CGTGGTGGTG ATCACCGTGG TAACCACCGT GGTGAGCGTG GTCACGGCCG TGGTCGTCGC
ACTCAAGAAG CATAA
 
Protein sequence
MQDSVIQFSD LSLNDSILSA LDGMGFVSPT PIQAAAIPHL LEGADALGKA QTGTGKTAAF 
SLPLLNKIDL NQRKPQAIVL APTRELAIQV AAEMKNLGKN IKGLKVLEIY GGASIVDQMR
ALKSGAQVIV GTPGRVQDLI NRERLHLDEV NTFVLDEADE MLNMGFVDDV TAIMEHAPES
AQRVLFSATM PPMLKKIVER FLREPVMVDV AGKNHTVDKV QQQFWVVKGV EKDEAMSRLL
ETEETDASIV FVRTRQDTER LADWLSARGF KAAALHGDIP QSLRERTVDH IKQGVIDILV
ATDVVARGLD VPRITHVFNY DIPFDVESYI HRIGRTGRAG RKGKAILLVR TNQIRMLRTI
ERVTKSSMEE IQLPLRDQVA EARLAKLGAE LEAEKEHKAL DKFAELVEKL QTSLDIDPAT
LAAMLLKRQQ GKRPLFYIGE DPMVEAIERD KQRRKERREG GRDGGRNFNN QDWDTYQLQV
GREQGVQVKD IVGALANELG LGKGSIGAIK LAQGHTFVQL PKAMTSEAAG KLSKLRIRQQ
DVGAVVCDFD DFRESRGGRR DGGRRDGGRR DGGGYRGNRE GGNRGGDRRE GGRREGGFRG
NRDGNRDGNR EGGERRFDRN RGGDHRGNHR GERGHGRGRR TQEA