Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001525 |
Symbol | |
ID | 8559838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1722489 |
End bp | 1724423 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646409195 |
Product | cold-shock DEAD-box protein A |
Protein accession | YP_003288673 |
Protein GI | 262396820 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000079582 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATT CTGTTATTCA ATTCAGCGAT TTATCTCTGA ATGATTCTAT CCTTTCTGCT CTAGACGGAA TGGGTTTCGT GTCACCAACT CCAATTCAGG CTGCGGCAAT CCCACACCTG TTGGAAGGTG CTGACGCGCT GGGTAAAGCT CAAACAGGTA CAGGTAAAAC GGCAGCGTTC TCTCTGCCTC TTCTAAATAA GATCGATCTC AACCAACGTA AACCACAAGC TATCGTTCTT GCGCCAACGC GTGAGTTAGC GATTCAGGTT GCGGCTGAAA TGAAAAACCT TGGTAAGAAC ATCAAGGGTC TTAAAGTTTT AGAGATTTAC GGTGGTGCTT CTATCGTAGA TCAGATGCGT GCTCTTAAGA GCGGTGCACA AGTTATTGTT GGTACTCCAG GTCGTGTACA AGACCTTATC AACCGTGAAC GTCTACACCT AGATGAAGTA AACACGTTTG TACTAGACGA AGCTGACGAA ATGCTAAACA TGGGTTTCGT TGATGACGTT ACTGCGATCA TGGAACATGC ACCAGAGTCT GCTCAACGCG TTCTATTCTC TGCAACAATG CCTCCGATGC TTAAGAAAAT CGTTGAGCGG TTCCTACGTG AGCCTGTAAT GGTTGACGTT GCTGGTAAGA ACCACACTGT AGACAAAGTT CAACAGCAGT TCTGGGTAGT GAAGGGTGTA GAGAAAGATG AAGCGATGTC TCGTCTTCTT GAAACGGAAG AAACTGATGC ATCAATCGTC TTCGTACGTA CTCGTCAAGA CACTGAGCGT CTAGCTGATT GGCTATCTGC ACGTGGCTTT AAAGCGGCTG CTCTGCACGG TGACATTCCT CAGTCTCTAC GTGAGCGTAC TGTTGATCAC ATCAAACAAG GTGTTATCGA CATCCTAGTT GCAACTGACG TTGTGGCACG TGGTCTTGAT GTTCCACGTA TTACGCACGT ATTCAACTAC GACATCCCAT TCGATGTTGA GTCTTACATC CACCGTATCG GTCGTACTGG CCGTGCTGGA CGTAAGGGTA AAGCTATCCT TCTAGTTCGC ACTAACCAAA TTCGTATGCT TCGCACTATC GAGCGTGTAA CTAAGTCATC TATGGAAGAA ATTCAACTTC CTCTACGTGA CCAAGTTGCT GAAGCTCGTC TAGCTAAACT AGGCGCTGAG CTTGAAGCAG AGAAAGAGCA CAAAGCTCTA GACAAATTTG CTGAGCTGGT AGAGAAACTA CAAACTTCTC TAGACATCGA CCCAGCAACG CTTGCTGCTA TGCTTCTTAA GCGCCAGCAA GGTAAACGTC CTCTGTTCTA CATTGGCGAA GATCCAATGG TTGAAGCGAT TGAGCGTGAT AAGCAACGCC GCAAAGAGCG CCGTGAAGGT GGTCGTGACG GCGGTCGTAA CTTCAACAAC CAAGATTGGG ATACTTACCA GCTTCAAGTT GGTCGCGAGC AAGGTGTTCA AGTTAAAGAC ATCGTTGGTG CTCTAGCGAA CGAACTAGGT CTAGGTAAAG GCTCTATCGG TGCGATCAAA CTAGCACAAG GCCACACATT CGTTCAGTTA CCAAAAGCAA TGACTTCTGA AGCTGCGGGC AAGCTAAGCA AACTACGCAT CCGTCAACAA GATGTTGGTG CTGTAGTATG TGACTTCGAT GACTTCCGAG AGTCTCGTGG TGGTCGCCGT GACGGTGGTC GTCGCGATGG CGGTCGTCGT GATGGCGGCG GTTACCGTGG CAACCGCGAA GGCGGCAACC GTGGTGGTGA TCGTCGTGAA GGCGGTCGTC GCGAAGGTGG CTTCCGTGGT AACCGTGACG GCAACCGCGA TGGTAACCGT GAAGGTGGCG AACGTCGCTT CGATCGTAAC CGTGGTGGTG ATCACCGTGG TAACCACCGT GGTGAGCGTG GTCACGGCCG TGGTCGTCGC ACTCAAGAAG CATAA
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Protein sequence | MQDSVIQFSD LSLNDSILSA LDGMGFVSPT PIQAAAIPHL LEGADALGKA QTGTGKTAAF SLPLLNKIDL NQRKPQAIVL APTRELAIQV AAEMKNLGKN IKGLKVLEIY GGASIVDQMR ALKSGAQVIV GTPGRVQDLI NRERLHLDEV NTFVLDEADE MLNMGFVDDV TAIMEHAPES AQRVLFSATM PPMLKKIVER FLREPVMVDV AGKNHTVDKV QQQFWVVKGV EKDEAMSRLL ETEETDASIV FVRTRQDTER LADWLSARGF KAAALHGDIP QSLRERTVDH IKQGVIDILV ATDVVARGLD VPRITHVFNY DIPFDVESYI HRIGRTGRAG RKGKAILLVR TNQIRMLRTI ERVTKSSMEE IQLPLRDQVA EARLAKLGAE LEAEKEHKAL DKFAELVEKL QTSLDIDPAT LAAMLLKRQQ GKRPLFYIGE DPMVEAIERD KQRRKERREG GRDGGRNFNN QDWDTYQLQV GREQGVQVKD IVGALANELG LGKGSIGAIK LAQGHTFVQL PKAMTSEAAG KLSKLRIRQQ DVGAVVCDFD DFRESRGGRR DGGRRDGGRR DGGGYRGNRE GGNRGGDRRE GGRREGGFRG NRDGNRDGNR EGGERRFDRN RGGDHRGNHR GERGHGRGRR TQEA
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