Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001437 |
Symbol | |
ID | 8559749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1628937 |
End bp | 1629995 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646409106 |
Product | non-specific porin |
Protein accession | YP_003288585 |
Protein GI | 262396732 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.524484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA AATTATTAGC AGCGGCAATC GCAGCAGCAA CTTTCGGCAC TCAAGCAGTG GCAGTGGAAC TTTATAATAA CGATGGCACA ACATTTTCGA TGGGCGGCCA CGTTTCTGTT AACTTAAATG GTTCAGAGCA AGGTGACACG GATGTTGGTA CTAACTCTCC TCGTATCAAT ATCTCTGCGA CACAAGATTT AGGCAATGGC TTCACCGCAG ACGCACGTGG TGAATGGGCT CTAAACTACT TAGATGGCGG TGAAGAGTCG TTTAAAACTC GTCTAGGTTA CTTAGGTTTA ACACATGAGG TTTACGGTCG TGCAGTAGGT GGTACGCAAT GGTCACCTTA CTATGATGTA GCAGGCATCG CGGATATGCC AATTGCGTTT GCGAATGACT TCATTTACGA CGATCACGGA AACCTAGGCA CAGGTCGTGC GGATAAAATG CTGTCTTATC GCAATGGCTT TGATTTAGGC GAAGCAGGTG TGATTAACGT TGGTCTTGGA TGGCAAGGCG CAAATGATGA ATACACGCGT AACGACGCAG GTACTATCAC TGGTGGTCTT AAATACGATG ACCGCATGCA AGTTGCACTT TCTTACGCAA TCATAGGCGC GAAAATTGGC TACTCATACA ACGGTGGTGA CTTCCAACAC CCTGCTTACA CAGGTAAACA CACCGCAGAA TCACATGTTG TGTCTGCATC TTACGGCGCT TACGGCCAAG GTCTGTTCCT TGCCGCGGTA TATGGTTCAA ATGAAAATAT GAACTTCAGT GTAAATGGCG ACCGTTTGGC GGAAAGTGAT GCGTACGAAG CGATCATCGC ATACGCTCTA GCGAACAGCT TAAACTTGAG CGTTAACTAC GAGATGGTTG AAGGTAAAGA GTTCAAAAAT TCTAAAACAG AAACCGCTCG TGAGGAAATG GCACTGCAGG CAGAGTACAA CTTCACGCCT AAATTTGTTG GTTACGCGGG TTACCAGTTT GACCTAAATG ATGACCATGG TCGTGAAACT GATGACAAAT GGGCGATAGG TGCTCGTTAC TACCTATAA
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Protein sequence | MNKKLLAAAI AAATFGTQAV AVELYNNDGT TFSMGGHVSV NLNGSEQGDT DVGTNSPRIN ISATQDLGNG FTADARGEWA LNYLDGGEES FKTRLGYLGL THEVYGRAVG GTQWSPYYDV AGIADMPIAF ANDFIYDDHG NLGTGRADKM LSYRNGFDLG EAGVINVGLG WQGANDEYTR NDAGTITGGL KYDDRMQVAL SYAIIGAKIG YSYNGGDFQH PAYTGKHTAE SHVVSASYGA YGQGLFLAAV YGSNENMNFS VNGDRLAESD AYEAIIAYAL ANSLNLSVNY EMVEGKEFKN SKTETAREEM ALQAEYNFTP KFVGYAGYQF DLNDDHGRET DDKWAIGARY YL
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