Gene VEA_001392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001392 
Symbol 
ID8559704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1576352 
End bp1577203 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content47% 
IMG OID646409061 
Productbeta-lactamase 
Protein accessionYP_003288540 
Protein GI262396687 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000730239 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TATTTTTGTT GGCTGGGCTA ATGGTTTGCT CAACCCTAAG TTACTCTTCC 
CAACTGAATG AAGACATTTC TCTCATCGAA CAACAAACCT CAAGCAGAAT TGGAGTCTCG
GTTTGGGATA CGCAAACCGA TGAGCGCTGG GATTACCGTG GCGATGAACG CTTCCCACTC
ATGAGCACAT TCAAAACCTT GGCTTGCGCC ACAATGCTAA GTGATATGGA CAGCGGTAAG
CTAAGTAAAA ATGCGACCGC GAAAATCGAT GAGCGCAGCA TCGTTGTGTG GTCTCCAGTG
ATGGACAAAC TCGCAGGCCA AAGCACACGC GTAGAGCACG CTTGTGAAGC CGCGATGTTG
ATGAGTGATA ATACTGCTGC CAACTTAGTA TTGAATGAAA TCGGCGGCCC TAAGGCCGTG
ACAATGTTTC TGCGATCAAT TGGTGATAAA GCGACGCGCC TAGATAGATT AGAACCACGT
TTGAACGAAG CGACACCGGG AGACAACCGC GACACAACCA CACCTAACGC CATGGTAAAC
ACTCTGCGAA CCTTGATTGA AGGAGAAACG TTGTCTTACG AGTCTCGCGT GCAATTAAAA
ATCTGGATGC AGGACAACAA GGTTTCAGAC TCGTTAATGC GTTCAGTATT ACCAACAGGT
TGGTCTATCG CCGACCGCTC TGGTGCGGGT GGTCACGGTT CGCGTGGTAT TAACGCAATC
ATATGGAAGG AAAACCATCG TCCTGTTTAC ATTAGTATCT ATGTCACAGA AACCGAGCTA
TCACTGCAAG CCAGAGACCA GCTCATCGCG CAAATCAGTC AGTTGATTTT ACAGAAATAC
AAAGATAATT AA
 
Protein sequence
MKKLFLLAGL MVCSTLSYSS QLNEDISLIE QQTSSRIGVS VWDTQTDERW DYRGDERFPL 
MSTFKTLACA TMLSDMDSGK LSKNATAKID ERSIVVWSPV MDKLAGQSTR VEHACEAAML
MSDNTAANLV LNEIGGPKAV TMFLRSIGDK ATRLDRLEPR LNEATPGDNR DTTTPNAMVN
TLRTLIEGET LSYESRVQLK IWMQDNKVSD SLMRSVLPTG WSIADRSGAG GHGSRGINAI
IWKENHRPVY ISIYVTETEL SLQARDQLIA QISQLILQKY KDN