Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001352 |
Symbol | |
ID | 8559664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1535195 |
End bp | 1536064 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646409021 |
Product | periplasmic hemin-binding protein |
Protein accession | YP_003288500 |
Protein GI | 262396647 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00152627 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACA CACGTGCCAC CATTCATGCT GTTGTTACGG CAGCCATTTC CCTACTTGCG AGTAGCCAAC TTTTTGCCAA TGAAACACCA TCATCAGAGC GTGTTGTTAG TGCAGGCAGT GCCGTCACTG AACTGTTGCT TGAACTCGAC GCCAAAGATA GCTTGGTTGC TATCGACGTA ACCAGTCAGT TACCAAAAGG CATGGAACTG CCTAAAGTAG GCTACCATCG CCGCCTTTCA GCAGAAGGGT TGCTCGCCTT ACGTCCGACA AAAGTCATTG GCTCTGATGA GATGGGACCG AAAACGGCAT TGAACCAATT AAAAGCGGCG GGGGTAGATG TAGAAATCGT CAATACCGAT GCCAACGTTG AGGGCCTTTA CCAACGTATC GATCAAATTG CGAACCTTAT GAATCGCCAG GCTAAAGCGG AAGATTTAAA GCAAGATGTG AAAGCGCAAG TTCAAGCACT CAATGCAAAT CAACCTGCTC AAGCTCAGAA AAAGAAAGTA CTGTTTCTAC TCATCCATGA AGGTCGACCT GCGAACGTTG CAGGATCAGA AACCACCCCC GATGCAATTA TCCAGCTAGC AGGCGGACTA AACCCAGCTG CTGACCAGCT GTCTTCTTAC AAGCCTTTAT CCACAGAAGC CATGGTAGAG ATGCAGCCTG ACGTTATTCT CGTTAGCGGT CGCAGCTATG AAACGCTGGG CGGTGCCGAT GCGATTTTAA AAGCAATGCC ACTTCTCGCC GCAACACCTG CGGGAATGAA TAAAAATATC ATCACGATTG ACGGTCACGC CCTTGTTGGT GGTTTGGGTC TTAAAAGCCT TGTAGAAGCC GAACGCTTGA ATGCGCTGCT TTACCCATAG
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Protein sequence | MKNTRATIHA VVTAAISLLA SSQLFANETP SSERVVSAGS AVTELLLELD AKDSLVAIDV TSQLPKGMEL PKVGYHRRLS AEGLLALRPT KVIGSDEMGP KTALNQLKAA GVDVEIVNTD ANVEGLYQRI DQIANLMNRQ AKAEDLKQDV KAQVQALNAN QPAQAQKKKV LFLLIHEGRP ANVAGSETTP DAIIQLAGGL NPAADQLSSY KPLSTEAMVE MQPDVILVSG RSYETLGGAD AILKAMPLLA ATPAGMNKNI ITIDGHALVG GLGLKSLVEA ERLNALLYP
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