Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001319 |
Symbol | |
ID | 8559631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1502367 |
End bp | 1503200 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 646408988 |
Product | capsular polysaccharide synthesis enzyme cpsE |
Protein accession | YP_003288467 |
Protein GI | 262396614 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.201605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTATT CAATCTCTCG ACAATTTGAA AAGAACCGAG AACTCCAAGC TGACAATTTT GTTTTAGTTT ACCAAATGGG CAAAGTTGGC TCATCGTCAA TTGAGCACAC GCTGGGAGAA AGAAATATCC CGAGCTATCA CATCCACACC TTTGATGATC ACGAAGAATT TCACATGTAT CACAATAAAA AAGACGTGAG TAAATTTTTC GATTTCAAAA ACCGTGCGCT CTACCGCTTA GTACTCAAGC AACGAAAACG TATCTTACAA AAACGCGAAC AGATCAAAAT CGTCACACTG GTCCGCGATC CAATCGCAAC AGTCTTTTCT CGTTTCTTTC AAGACCTCCA TTTGCAATTT ATCGAAGGCA AAAAGAATGA TGCAATTCAC CGAGATATGG CAGTCACGTA TCAGCACCTC GAACATTGTT TCGATAACTA TATCAATCTC AACTATTTTG CGGACTGGTT CGACAACGAG TTAAAACGTA ACTTCAATAT CGATGTGATG CGTCAAGAAT TGGACAACAC TCAACCTTTC TTCACATTCA AGAACGAGCA AGCCAACGTC ATGCTAATCA AATGCGAAAA GCTCAGCTCT CTCGATAAAG AAATTGGCGA GTTTCTCGGG CTGCAAGACT TCGTGCTGAA AAACAGCAAT GAAGCGAAAA ACAAGTGGTA CTCCAATATC CACCAGCACT TTAAGCATCA CTACGACTTT TCAAAGCTGT TCTATATGTA CGATCTTCCC TTATATCGCC ACGTTTATTC AGAACAAGAA CGTGATGCTT TCAAGCATAA ATGGATGCAG ACAGCAGGAA CAAAATCATC ATGA
|
Protein sequence | MKYSISRQFE KNRELQADNF VLVYQMGKVG SSSIEHTLGE RNIPSYHIHT FDDHEEFHMY HNKKDVSKFF DFKNRALYRL VLKQRKRILQ KREQIKIVTL VRDPIATVFS RFFQDLHLQF IEGKKNDAIH RDMAVTYQHL EHCFDNYINL NYFADWFDNE LKRNFNIDVM RQELDNTQPF FTFKNEQANV MLIKCEKLSS LDKEIGEFLG LQDFVLKNSN EAKNKWYSNI HQHFKHHYDF SKLFYMYDLP LYRHVYSEQE RDAFKHKWMQ TAGTKSS
|
| |