Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001286 |
Symbol | |
ID | 8559598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1464043 |
End bp | 1465077 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646408955 |
Product | osmosensitive K+ channel histidine kinase KdpD |
Protein accession | YP_003288434 |
Protein GI | 262396581 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.135426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGCTC ATTGGCGAGA TAACACATTT CTCTTTTCTG CCATCGTGAT TGTTGGCGCG GTTGTGGCCT CATGGCTGTT GGACCAATTG TTTGGCTCTA CCGCTGCGGT CCTGCTGATT TTGCAGTTAG CAGTTGTGGT GGTGGCGTTT CAATACAACT CGCGATTCGC TTATGCGGCG GCGGTGATCG AAGCGTTGAG CTTCAACTTC TTTTTCACGA CGCCTCGTTA CTCTTTGCAG ATGCTTCGTC CGGAAGACAT TTTTAATCTA GTCGTGTTTA TGGTGGTGGC ATTTATCACC AGCACTTTTG CAGATCTTTA TCGTCGCCAG CAGGGCGAGT TAAAACAAAC CAAGCTGCAA AACAGCATCC TGCTATCGGT GTCCCATGAC CTACGCACGC CGCTGGCAAC CATTATTGGA ACATTGACCA CACTCAACGA GTACATGCCC AAGCTCAATG ACTTAGAGCG TAAAGAATTG CTCGACAGTG CGACTTCAGA AAGCCACCGC TTGCATCAAT ATATCGAGAA CCTCTTACAG GCGACTAAGC TCCAGCACGG TACATTAAAA ATTACCAAAA AAGACGAGTC GATTGCAGAT ATTGTTCGGG ATGCGGTTTC TCGTTTGCCG AATTACACCG AGAAAGTGTC CATGAATATA GATGATTCCG TTGGTCATTT GTCAGTAAGT CGTTCGCTCA TCGAACAAGC GATTTTTAAT GTGTTGGATA ATGCCATGCG ATTTTCACCA GAGAATGAAT CTGTTGAGGT TTCACTTTCT AAGCAGGGTT CGTCGTGCGT GATTGATGTT CGGGACATGG GGATTGGCAT CAAAGCTGAA GATGCGGAAA AAATATTCAA CCTTTTCTAT TCCGGCGTGA ACAACAAATC GGCCGATTCA GGAACCGGAA TGGGACTCGC GGTTGCCAAA GGCATCATCA CCGCACACCA AGGAGAGATT CAATCTATGC CAGTATCAGA AGGGACGCTG ATCCGCATTC GACTTCCACT CAATCAAGGA GCAGAGCAGG CGTGA
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Protein sequence | MFAHWRDNTF LFSAIVIVGA VVASWLLDQL FGSTAAVLLI LQLAVVVVAF QYNSRFAYAA AVIEALSFNF FFTTPRYSLQ MLRPEDIFNL VVFMVVAFIT STFADLYRRQ QGELKQTKLQ NSILLSVSHD LRTPLATIIG TLTTLNEYMP KLNDLERKEL LDSATSESHR LHQYIENLLQ ATKLQHGTLK ITKKDESIAD IVRDAVSRLP NYTEKVSMNI DDSVGHLSVS RSLIEQAIFN VLDNAMRFSP ENESVEVSLS KQGSSCVIDV RDMGIGIKAE DAEKIFNLFY SGVNNKSADS GTGMGLAVAK GIITAHQGEI QSMPVSEGTL IRIRLPLNQG AEQA
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