| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001285 |
|---|
| Symbol | |
|---|
| ID | 8559597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1461995 |
|---|
| End bp | 1463806 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646408954 |
|---|
| Product | putative hemolysin secretion ATP-binding protein |
|---|
| Protein accession | YP_003288433 |
|---|
| Protein GI | 262396580 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000363731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCG AAAAGCCACC GAAGACACTT TTTGGCTTCT GTCGCTTTTA CACTCGTGGC
TTTGAAGCCC CTTTACTTGT CATGGCTGTG TTCAGTGCGC TTATTGCCAT TACTGAGGTG
ACGCTGTTGC GTTATATGGG TGAGCTCGTC GATATTCTCT CTAATCAGGA TCGCGCAACA
TTCTGGCAAG ATCAGGGTGA TCGCATGCTA ATGATGCTGT TCTTAGTGGC GGTTGTGATG
CCAGCTCTCG GTTTTGTCCA CTCAATGGTG ATGCACCAAA CGTTATTGGG TAACTACCCG
ATGTCTATCC GTTGGTTGAT TCATCGTTAC TTGCTAAAAC AAGCGGTTGG ATTTTTCCAA
CGTGACTTTG CAGGCCGAGT TGCGACCAAA GTGATGCAAA GTGCGTTAGC GGTACGAGAA
ACGGTCATGA AGTTGGTGGA TGTACTGGTT TATATCAGCG TTTATTTTCT TTCGATGCTT
TGGATGATGG GCGAGGCCGA TGGTTTGCTG ATGTTGCCTA TTGTGATTTG GATAGGAATG
TACGCGGTTA TCCAGTTCTA CTTTATCCCT AAAATGAAAC AAGTAGCGAC AGAGCAAGCG
GATGCTCGCT CTGTAATGAC TGGACGCATT GTCGATTCTT ACACCAACAT TTCTACCGTA
AAACTATTCG CTCATTCACA GCGAGAGTTG GAATACGCAG AAAGCAGCAT GAAGCAATTT
TTGGTGACGG TTTACCGCCA AATGCGCATG GTGACTTGTT TGCTGTTTAG TGTCGATGCC
ATCAACTATT TACTGCTGAT GTCTATCAGT GCCATTTCGG TTTATCTATG GCTAGATCAC
GCTGTAACAA TTGGTGCTAT TGCGATTGCC ATTAGTATTG CGTTGCGCGT ACAAGGAATG
TCGAAGTGGA TCATGTGGGA AGTTAGTGCA CTGTTTGAAA ACATCGGTAC GGTAGTGGAC
GGTATTAATA CGATTTCAAA CGACGTCGAA GTAAAAGACA TACCAAATGC CAAGCCTCTG
CAAATCTCTC AAGGTGAGAT CTGCTTTGAT CACGTAGGTT TTAACTACAG TGATGAGAAG
GCAGTATTTG AGAACTTGAA TCTGACTATC AAACCGGGCG AAAAAGTCGG CATTGTCGGT
CGCTCTGGGG CAGGTAAATC CACGTTGGTC AACTTGTTGC TGCGCTTTTA CGACGTAAAT
AGCGGTAAGA TTTGTATTGA TGGACAGGAC ATTTCGCAAG TCGAACAAGA GTCGCTTCGC
CAACACATCG GTATGATCAC GCAAGACACC TCTTTGCTGC ATCGTTCAAT TAAAGAGAAC
ATTCTTTACG GTGATCCAGA TGCTTCAATG GATGCCGTTA TCGCAGCTGC TGAGAAAGCA
CATGCCCATG ATTTCATTCA ATCTCTACGA GACGAGCAAG GTAACGTTGG CTATGACGTT
GAAGTGGGTG AACGCGGTGT GAAGCTGTCT GGTGGTCAGC GTCAACGTGT GGCGATTGCT
CGCGTGCTGC TGAAAAACGC GCCAATTTTG ATCATGGATG AAGCAACGTC TGCACTTGAT
TCAGAAGTAG AATCGGCAAT TCAAGAAAAC CTTGAAGTTC TGATGGAAGG AAAAACTGTG
ATTGCGATTG CTCACCGTTT ATCAACGATT GCCGCGATGG ATCGTTTGAT TGTGATGGAT
GACGGCAAAA TCATTGAGCA AGGCTCGCAT TACGAGCTGC TGCAATTGGG TGGTGTTTAC
GCTCAGTTGT GGAAGCATCA AACCGGCGGC TTTTTGTCTG AGCAAGGTGA TGCTCAACTG
CAAGTCATCT AA
|
|---|
| Protein sequence | METEKPPKTL FGFCRFYTRG FEAPLLVMAV FSALIAITEV TLLRYMGELV DILSNQDRAT
FWQDQGDRML MMLFLVAVVM PALGFVHSMV MHQTLLGNYP MSIRWLIHRY LLKQAVGFFQ
RDFAGRVATK VMQSALAVRE TVMKLVDVLV YISVYFLSML WMMGEADGLL MLPIVIWIGM
YAVIQFYFIP KMKQVATEQA DARSVMTGRI VDSYTNISTV KLFAHSQREL EYAESSMKQF
LVTVYRQMRM VTCLLFSVDA INYLLLMSIS AISVYLWLDH AVTIGAIAIA ISIALRVQGM
SKWIMWEVSA LFENIGTVVD GINTISNDVE VKDIPNAKPL QISQGEICFD HVGFNYSDEK
AVFENLNLTI KPGEKVGIVG RSGAGKSTLV NLLLRFYDVN SGKICIDGQD ISQVEQESLR
QHIGMITQDT SLLHRSIKEN ILYGDPDASM DAVIAAAEKA HAHDFIQSLR DEQGNVGYDV
EVGERGVKLS GGQRQRVAIA RVLLKNAPIL IMDEATSALD SEVESAIQEN LEVLMEGKTV
IAIAHRLSTI AAMDRLIVMD DGKIIEQGSH YELLQLGGVY AQLWKHQTGG FLSEQGDAQL
QVI
|
|---|
| |