| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001249 |
|---|
| Symbol | |
|---|
| ID | 8559561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1415461 |
|---|
| End bp | 1416171 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646408918 |
|---|
| Product | purine nucleoside phosphorylase |
|---|
| Protein accession | YP_003288397 |
|---|
| Protein GI | 262396544 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0813] Purine-nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.328135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCC CACACATCAA TGCACAACCA GGTGATTTCG CTGAAACGGT TCTAATGCCA
GGCGACCCTT TACGTGCTAA ATACATCGCA GAAACGTTTC TTGAAGATGT GAAGCAAGTT
TGTGACGTTC GTAACATGTT CGGCTTTACT GGCACTTACA AAGGCAAAAA AGTGTCTGTT
ATGGGTCACG GCATGGGTAT CCCTTCTTGC TGTATCTACG TACACGAGCT AATCGCAGAA
TACGGCGTGA AAAACGTAAT CCGTGTAGGT AGCTGTGGTG CGGTACGTGA CGACGTTAAC
CTAATGGACG TTGTTATCGG TATGGGTGCT TCTACAGACT CTAAAGTAAA CCGTATCCGT
TTCAACAACC ACGACTTCGC TGCAATCGCT GACTACGGCC TTCTAGAAGA AGCGGTAAAC
CAAGCGCGTG CTCAACAAGT ACCAGTGAAA GTTGGTAACG TATTCTCTGC AGACCTGTTC
TACACACCAG AAGCTGACAT CTTCGAGAAG ATGGAAAAAC TAGGCATCCT AGGTGTAGAC
ATGGAAGCGG CTGGTATCTA CGGTGTTGCT GCAGACCTAG GTGCGAAGGC GTTAACGATC
CTAACGGTTT CTGACCACAT CATCCGTGGC GAAAAACTAA GCTCAGAAGA GCGTCAAAAG
TCGTTCAACG ACATGATGAA AGTTGCGCTA GAAACCGCAA TCAACATCTA A
|
|---|
| Protein sequence | MATPHINAQP GDFAETVLMP GDPLRAKYIA ETFLEDVKQV CDVRNMFGFT GTYKGKKVSV
MGHGMGIPSC CIYVHELIAE YGVKNVIRVG SCGAVRDDVN LMDVVIGMGA STDSKVNRIR
FNNHDFAAIA DYGLLEEAVN QARAQQVPVK VGNVFSADLF YTPEADIFEK MEKLGILGVD
MEAAGIYGVA ADLGAKALTI LTVSDHIIRG EKLSSEERQK SFNDMMKVAL ETAINI
|
|---|
| |