Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001215 |
Symbol | |
ID | 8559527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1375999 |
End bp | 1376544 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646408884 |
Product | CsuA |
Protein accession | YP_003288363 |
Protein GI | 262396510 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.748118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTTC ATATGAAAAT TTTTTGTTTG ATTATTCCCT TGTTATTTAC AGTGTTGAGC TTACAAACGA GGGCAGAGAC AATTAGCGGT ACGATAGACG TTTCGATCAA TTTAGTGGAA GGCTGTGTCA TTAATGGCAA CAATGCGGTG AACGGTTCCA GTAATATTGG TTTTGGCTCA TTAAATTTTG GTGACGTTCC GGCCATTTTT ACTGAGCAAG AAGCAGTCTT GACTGGGGAA GGTGGTACGG GGATCGAAAT ACTTTGCAGC AATGGAGTCA CGCCTACTTT CTCTTTAGTC AGTGGTGCCA ACGATCCCAG TTCGACGACA GGTAATCACG CAATGACCAA CGGATCCGAG TTTGTGGATT ACACTCTCTT CACTGATTCA GATCGTTCTA CCCAGTTTAC CTCGAGTAAC CCTATAGCAC TCTCTACATT TAATGGTGTT GATTCAGAGA CCATTAATTT GTACGCCACG GCATACGGTA CCAGCAGCGT CGCAGGGAGT TATGTTGATA CACTAAACGT AACTCTGAGT TGGTAA
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Protein sequence | MELHMKIFCL IIPLLFTVLS LQTRAETISG TIDVSINLVE GCVINGNNAV NGSSNIGFGS LNFGDVPAIF TEQEAVLTGE GGTGIEILCS NGVTPTFSLV SGANDPSSTT GNHAMTNGSE FVDYTLFTDS DRSTQFTSSN PIALSTFNGV DSETINLYAT AYGTSSVAGS YVDTLNVTLS W
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