| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001178 |
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| Symbol | |
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| ID | 8559491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1344458 |
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| End bp | 1345234 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408849 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_003288328 |
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| Protein GI | 262396475 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.795861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCATCA CATTTGCAGA GCTCTCAGCG ATACTCGGTC AACTCTGGTG GCCGTTTTTT
CGTGTGGGAG CCGTATTTAT TTCGATGCCC TTCTTTGGTG ATGCAATCAT TCCCGTTTGG
ATCCGTACCT TACTGGCACT TTCGATCGTC GTGATTACCG CACCATTGAT GCCACCAATG
CCACAAGTCG AATTGTTCTC CATGACGTCT CTATTCCTTG CTTTTGAGCA AGCGATTTGG
GGCGTGATGT TTGGGCTAAT TTTGCACATG CTCTTTAACG TTTTCACCAT GCTTGGTCAG
GTCGTTTCTC TGCAAATGGG ATTGGGTATG GCAATGATGA ATGATCCTAT CAACGGACTT
TCTGTCGCCA TTTTGGGCCG TATATTTCTT ATATTTTCAA CCTTGTTATT TCTCGCGCTA
GAAGGACACT TGCTCGTCAT TGATATCGTG ATTCAAAGTT TTGTCGTGTG GCCGGTCGGT
TCTGGCATCA CATCGCTTTC TCTGCAAGGC GTTGTAAATA TTTTCGGTTG GATGTTTGCC
TCTGCTTTAG CACTAGCGTT GCCTGCTATT GTTTCAATGC TCCTAGCCAA CATCAGTTTT
GGTGTGATGA ATCGCGCCGC CCCCTCACTC AACGTGTATG CCTTAGGTTT TCCAATGACG
ATGCTTCTTG GCCTGTTCAG CGTATTAATT TCAGTATCTG GTGTGCCGGG TCGCTACACC
GCGCTTGTGC ACGACACCAT CAGACACTTG AGTAACTTTA TGTTGGGGGG CGCATGA
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| Protein sequence | MAITFAELSA ILGQLWWPFF RVGAVFISMP FFGDAIIPVW IRTLLALSIV VITAPLMPPM
PQVELFSMTS LFLAFEQAIW GVMFGLILHM LFNVFTMLGQ VVSLQMGLGM AMMNDPINGL
SVAILGRIFL IFSTLLFLAL EGHLLVIDIV IQSFVVWPVG SGITSLSLQG VVNIFGWMFA
SALALALPAI VSMLLANISF GVMNRAAPSL NVYALGFPMT MLLGLFSVLI SVSGVPGRYT
ALVHDTIRHL SNFMLGGA
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