Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001092 |
Symbol | |
ID | 8559405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1249061 |
End bp | 1251208 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646408763 |
Product | ornithine decarboxylase |
Protein accession | YP_003288242 |
Protein GI | 262396389 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAG ACTTTAGCTT ATTAGCTGAA TCTTTAGATG AACAATTTAA TCGTCACTTA CTGCCTTTAG AACAAGTTGA ATTAACCGAC GTTGGTGCAG CTATTATTAC GTCAACAGAC ATTAAAGCGG GTCTGCACAG AATGATTTCG GAAACAGGGT ACGGAATCCC TGTTTTCTTA GTGACCGATG AAACTCCAGT TTCGGCAGAA GATTACGTTT GGTTAACGGG GGTTATTGAT TTAGAAAGAC AATCTATCGA TTACTACTGC CGTCAAATTA ATGAAGCCGT GACTAAATAT GAGTGTCGTC TGCTCCCTCC TTTCTTCAAG CAATTAACGC ACTACGTTGA GATGGGTAAC TCGGCGTTTG ACTGTCCAGG GCACCAAGGT GGTCAGTTCT TCAAAAAACA CCCTGCTGGT AAACAATTCT ACGATTTCTT TGGCGAAAAC CTATTCCGTA GCGACTTGTG TAACGCGGAC GTGGACTTAG GTGACTTACT GATCCACGAA GGTTCTGCAC ACCAAGCGCA AGCACACGCT GCAAAAGTAT TTAACGCTGA CAAAACTTAC TTCGTACTCA ACGGTACTTC TGCTTCAAAC AAAGTTGTGT GTAACGCGCT AGTAACTGAA GGCGATTTGG TATTGTTCGA CCGCAATAAC CACAAGTCGA ATCACCACGG CGCGTTAATC CAAGCGGGTG GTATGCCAGT TTATCTAGAA ACGGCGCGTA ACCCTTGGGG CTTCATTGGT GGTATGGATG AGCACTGTTT CGATGAAGAG TATATTCGTG CTCAAATCGC GAAAGTATCT CCAGAGCGTG CACGAGATGA ACGTCCGTTC CGTCTGGCCA TCATCCAGTT GGGTACTTAC GACGGTACAA TTTATAACGC TCGTTACGTC ATGGATAAGA TTGGCCACCT TTGTGACTAC ATCTTGTTTG ACTCGGCATG GGTAGGCTAT GAGCAGTTCA TCCCTATGAT GAAAGACTGT TCGCCACTGC TACTGGATCT GAAACCAGAA GATGCGGGTG TGATCGTGAC TCAGTCTGTT CACAAGCAAC AAGCTGGCTT CTCTCAAACG TCGCAAATCC ACAAAAAAGA CCGCCATATC AAAGGCCAAG CTCGTTACTG CAATCACAAA CGCTTTAACA ACGCGTTTAT GATGCACGCA TCGACATCTC CTTTCTATGC GTTGTTTGCT GCATTGGATG TGAACGCGAA GATCCACGAT GGTGAAGCAG GCTTACGTTT ATGGAGCGAC GCGGTTAAGA CCGGTATCGA AGCGCGTAAA GAAATTCTCA AAAGTTGTGA GTTAATTCGT CCGTTCATTC CAAATGAAAT TGAAGGTCAA CCTTGGGGCA GTTACGACAC TGATGTGATC GCGACCAACA AGAAGTTCTT CATGTTCGAG CCAGATGCAA ACTGGCACAA GTTTGAAGGT TATGGCGAAG GTCAATACTT TGTTGACCCA TGTAAATTGT TGCTAACCAC GGCAGGTATT GCAGAAGACG GCAGCTACGC AGATTTCGGT ATTCCGGCAA CGCTATTGGC GAACTTCCTT CGAGAAAACG GCATCATCCC TGAGAAGTGT GACTTGAACT CCATCTTGTT CCTACTCACT CCTGCTGAAG ATATGGGTAA GATCCGTCAC CTTGTCGCGC AAATCAACCG ATTTGAAAAA TTCATTCGTG ATGATGCACC TCTCAGTATC GTGCTACCAG GCGTCTACGA AGCGAACAAA GAGCGCTACC GTGGTTACAC CATCCGTCAG CTATGTCAGG AAATGCATGA CATGTACAAA GAGCTGAACG TGAAACAGCT ACAAAAAGCG ATGTTCCGCA GTGAATACTT CCCACAAATG GTTCACAAAC CAGACGTGGC AACACGCAAA TACTTCCGCG GTGAATGCGA TTACCTACCA CTTAAAGAGG CCGTCGGCCG CGTAGCCGCC GAAGGTGCGC TGCCTTACCC TCCAGGCATT ATCTGTGTGA TCACTGGTGA AATCTGGACC CAACAGGTGG TGGATTACTT CTTATCTCTA GAAGAAGGCA TCAACCGATT CCCAGGCTTC GCGCCAGAAA TTCAAGGTGT GTACCTTGAA GATGTCGACG GTCGCACTAC CGCACATTGC TATGTCCTAA AAGATTAA
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Protein sequence | MPEDFSLLAE SLDEQFNRHL LPLEQVELTD VGAAIITSTD IKAGLHRMIS ETGYGIPVFL VTDETPVSAE DYVWLTGVID LERQSIDYYC RQINEAVTKY ECRLLPPFFK QLTHYVEMGN SAFDCPGHQG GQFFKKHPAG KQFYDFFGEN LFRSDLCNAD VDLGDLLIHE GSAHQAQAHA AKVFNADKTY FVLNGTSASN KVVCNALVTE GDLVLFDRNN HKSNHHGALI QAGGMPVYLE TARNPWGFIG GMDEHCFDEE YIRAQIAKVS PERARDERPF RLAIIQLGTY DGTIYNARYV MDKIGHLCDY ILFDSAWVGY EQFIPMMKDC SPLLLDLKPE DAGVIVTQSV HKQQAGFSQT SQIHKKDRHI KGQARYCNHK RFNNAFMMHA STSPFYALFA ALDVNAKIHD GEAGLRLWSD AVKTGIEARK EILKSCELIR PFIPNEIEGQ PWGSYDTDVI ATNKKFFMFE PDANWHKFEG YGEGQYFVDP CKLLLTTAGI AEDGSYADFG IPATLLANFL RENGIIPEKC DLNSILFLLT PAEDMGKIRH LVAQINRFEK FIRDDAPLSI VLPGVYEANK ERYRGYTIRQ LCQEMHDMYK ELNVKQLQKA MFRSEYFPQM VHKPDVATRK YFRGECDYLP LKEAVGRVAA EGALPYPPGI ICVITGEIWT QQVVDYFLSL EEGINRFPGF APEIQGVYLE DVDGRTTAHC YVLKD
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