Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001062 |
Symbol | |
ID | 8559375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1202624 |
End bp | 1203826 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 646408733 |
Product | vibrioferrin decarboxylase protein PvsE |
Protein accession | YP_003288212 |
Protein GI | 262396359 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAATT CACTCTCCCT ACCGACACGC GTTAGCCAGC AAGTTCACAC GCTCGCACAG CAGCAAAATC AACCCTTGTG CGCGTACGTG TATGACCTAA ACGCCTTAGA AGAACACATC AAACAACTGC GTCACGTTTT GCCGAGAAAT GTCGAGCTAT TTTACGCAGC CAAAGCCAAT CCATCGGGCC CGATTCTCAA AACGCTCGCG CCGTATGTCG ATGGTTTTGA AGCGGCGTCT GGCGGGGAGC TGGCACACCT CCACCAGCAA CAACTCGATA AGCCATTGAT CTTCGGTGGC CCAGGAAAAA TGCCAAGTGA ATTGCAACAA GCGATTGAGC TTGATGTTGA TGCAATTCAT GTCGAAAGCC TCACCGAGCT GCAACGCATT GGTGCACTAA CCGAGCGCCT CAACCGCCCT GCTTCGATCT TTTTGCGTAT GAACATCGAT ATTGGCGACA TCACGCTCAG CAAGTTGGCG ATGGGCGGCA AGCCAACTCC TTTTGGTTTG GACGAGTCCG AACTGAGTAA TGCTTTGATG TTGCTGCGCG ATTTCCCGCA AGTGTCACTC AAAGGCTTCC ATTTTCACTT GATGTCGCAT CAGCTCGATG TTGAACGTCA CTTAGCGTTA ATGCAGCGCT ATTTCCAAGT CGTGAAGGCG TGGCAACAAG AGTTTGAACT CGGTGAGCTG ATGATCAACT TGGGTGGAGG CATGGGGATT AACTACCAAA ACCCTGAGCA ACACTTTCCG TGGATGGAGT TTTGCGACAA GTTGGAATTC CTCATCGCCA AAGAGCAAGT GCAAGACTGG ACACTGCGTT TTGAATGCGG ACGTTTCATC ACGGCGGCAT GCGGTTACTA CGTAATGGAA GTGCTGGATA TTAAGCAAAA TCTTGGCGAA AACTTTGTCA TCGCGCGCGG AGGAACTCAC CACTTCCGCA CACCAGCAGC GCAGAGCCAT GATCATCCAT TCGTCATCCT GAAAAGCGAG CAACACCATG AGATTTCTCA TCCAATTCAG CATGCACAAG CGACCTTTGC CGGCCAGCTT TGTACGCCCA AAGATGTGCT GGCACGTAAT CAACACGTCG CCCACGTCGA TATTGGTGAT TACGTTGTGT TTACCTTAGC GGGCGCGTAT GCGTGGAACA TCTCCCATCA AAACTTCTTG ATGCATGAAC CGCCGATCTT CCACTATTTT TAA
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Protein sequence | MSNSLSLPTR VSQQVHTLAQ QQNQPLCAYV YDLNALEEHI KQLRHVLPRN VELFYAAKAN PSGPILKTLA PYVDGFEAAS GGELAHLHQQ QLDKPLIFGG PGKMPSELQQ AIELDVDAIH VESLTELQRI GALTERLNRP ASIFLRMNID IGDITLSKLA MGGKPTPFGL DESELSNALM LLRDFPQVSL KGFHFHLMSH QLDVERHLAL MQRYFQVVKA WQQEFELGEL MINLGGGMGI NYQNPEQHFP WMEFCDKLEF LIAKEQVQDW TLRFECGRFI TAACGYYVME VLDIKQNLGE NFVIARGGTH HFRTPAAQSH DHPFVILKSE QHHEISHPIQ HAQATFAGQL CTPKDVLARN QHVAHVDIGD YVVFTLAGAY AWNISHQNFL MHEPPIFHYF
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