Gene VEA_001033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001033 
Symbol 
ID8559346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand+ 
Start bp1172090 
End bp1172590 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content47% 
IMG OID646408704 
Producthypothetical protein 
Protein accessionYP_003288183 
Protein GI262396330 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA AATCATCATT GCTTATTTGG TCTGTGCTGT TGTCGACGGG ATTTATGCTT 
CCAATCGCTC AAGCAGCCGA TGGTAACTCA TCTTCGCAGC AAGTTTATCG CTCTGCTGAT 
CAGAAATCGT TTCAAGGACC TGAAAACCTA TTTACCGGGA AAGTTAACGT CGAGATGTTG 
TTTCCTGAAA ACGAAGTTGC AAACTACAGC GCCGCCTATG TCACTTTTGA TGCAGGAGCT 
CGAACCGCTT GGCATACTCA CCCAGCAGGA CAACACATGA TCGTCACTTC TGGTACCGCA 
CTTACAGGAA CGCGTGATGG GCATGTAATT CGATTTGCTG CTGGTGATAG TGTTTGGTGT 
CCTCCTGGTA TCGACCATTG GCACGGTGCA ACACCAAATG TGCCAATGAC TCATCTAGTG 
GTTACGGCGT CAAAAGACGG TGAAAACGTT ATCTGGAAAG AGCAAGTTAC CGATGGTCAG 
TATGCAGCAG GACAGCAATA A
 
Protein sequence
MKNKSSLLIW SVLLSTGFML PIAQAADGNS SSQQVYRSAD QKSFQGPENL FTGKVNVEML 
FPENEVANYS AAYVTFDAGA RTAWHTHPAG QHMIVTSGTA LTGTRDGHVI RFAAGDSVWC 
PPGIDHWHGA TPNVPMTHLV VTASKDGENV IWKEQVTDGQ YAAGQQ