| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001009 |
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| Symbol | |
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| ID | 8559322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1144417 |
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| End bp | 1146300 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408680 |
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| Product | GGDEF and EAL domain-containing protein |
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| Protein accession | YP_003288159 |
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| Protein GI | 262396306 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTACGG TCTTTATACT CTTGTTGGCA TCAGTATTCG TAATCCAATT CAACACGACT
CGAGACAGCT TGGAACAACA GCAACGTTCA GAGGTCAACA ACACCATTAA CACCGTAGGT
TTGGCATTGG CTCCTTACCT TAAAGACAAA GATAAAGTCG CGGTAGAATC CGTGATTAAT
GCTCTGTTTG ACGGCAGCAC CTACTCGGTT GTTCGCCTTA CCGCTTTAGA TTCTGACTAC
CAAATCGTGC GCACTTACCC GGTTAAACCA AGTACGGTGC CACAATGGTT TATCGACATG
AATCTATTCA AAGCCATTCA CGATAAGCGC GTAGTAACCA GTGGTTGGAT GCAACTTGCT
GAAGTGGAAA TCATTAGCCA CCCAGGAGCA GCTTACGAGC AGCTCTGGCA AGGCTTTATT
GGTTTGTTAT CTGCATTCAG TGTCATTTTC CTGGCTGGTT TAATTGCGAT TTCGTACATC
CTCCGTCGCT CACTAAAACC ATTAGCGGCC ATCGTGAAAA AAATGCATGA AATCGCTAAT
AACCAATTTG GTGAACCACT TGCTCGTCCA AGAACCAAAG ATCTGATCGC GGTCGTAGAT
GGCATTAACA TGATGTCTGC TCAAATTGAG CTGTCATTCA AAGAGCAAGC GAAAGAGGCA
CAACGACTGC GTGCTCAAGC TTACCTCGAT CCTATCTCCA AACTGGGTAA TCGCTCGTTC
TACATCAACC AAATCGACCA ATGGTTGGCA GAGCAAACGC AAGGGGGTAT CGCGCTACTC
CATGCAGAAT ACATTGGTGA CATTTACGAG ACAAAAGACT ACCAACGCGC CGATGCCCAC
GTAAAAGAGC TGTCTCAACG TCTGAAAAAC ACCATTGATG TGCCGGGAGC TACCATTGCA
CGCCTGTCTA GTGATGAATT TGGTCTGCTT TTCCCACACA TGGATGAAAG CGAACTACGC
ATTTTGGCGG ACAGCATCGT GAACTGCGTT AACGGGTTGA ACACTGATCC AACAGGTCTA
GCCAAACCAA AAGCAGCCTT AGGTGTTGCG CATAGTAAAG ACCAAAAAAC GCGCTCTGAA
ATCTTATCTA TGGTGGATAA TGCGCTCTCG AAAGCCAAAG CTCAACCAGA CAAAGCTTAC
GGCTTTATCG GCAGTGACAC ACCTTCTAAC TTAATGGGTA AACAGCAGTG GAAAGCGCTG
GTTGAAGAAG CGATTCATAG CGATTGGGTT AAATTCCGCT TCCAAGCAGC GAAGAACACT
TGGGGTAAAG TGTTCCATAA CGAAGTGTTC TCAAGCATCG AAAAAGAGGG CGAAACGTTC
CGTGCCAACC AATATTTATT CGCACTAGAG CAGCTAGACG CCACCAATAT TTTCGACCAA
TACGTTATTG AGTCGATGAT TAAGATGCTA GAAAGTGGCG AGCTAACTGA TCCTGTCGCG
ATCAATATTG CGCAAAGTAG CTTGTCTCAG CCATCGTTCA TTCGCTGGAC CACCAGCATG
TTGGAAAAAC ACGCAAAAGT GGCCTCTAAG CTACACTTTG AAATTCCAGA AGAGTGTTTT
ATTGATCAGC CTCACCACAC GGCGCTGTTA TGTAATGCCA TTCGCCAATC CGGGGCTGAG
TTTGGCGTAG ATAACTATGG ACGTAACTTC CAGTCATTGG AGTACATCCA AGAGTTCCGC
CCTAACTATG TGAAGCTCGA TTACCTATTC ACACACAACT TACACGACGA AAAACAGAAA
TTCACGCTAA CGTCGATTTC TCGTACGGCC CATAACCTAG GCATTACGAC TATCGCGTCG
CGTATTGAAA CTCAAATCCA GTTGGACTTC CTCACCGAGC ATTTTGTTGA GGTATTCCAA
GGATTCATCG TCGACAAGGA ATAA
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| Protein sequence | MVTVFILLLA SVFVIQFNTT RDSLEQQQRS EVNNTINTVG LALAPYLKDK DKVAVESVIN
ALFDGSTYSV VRLTALDSDY QIVRTYPVKP STVPQWFIDM NLFKAIHDKR VVTSGWMQLA
EVEIISHPGA AYEQLWQGFI GLLSAFSVIF LAGLIAISYI LRRSLKPLAA IVKKMHEIAN
NQFGEPLARP RTKDLIAVVD GINMMSAQIE LSFKEQAKEA QRLRAQAYLD PISKLGNRSF
YINQIDQWLA EQTQGGIALL HAEYIGDIYE TKDYQRADAH VKELSQRLKN TIDVPGATIA
RLSSDEFGLL FPHMDESELR ILADSIVNCV NGLNTDPTGL AKPKAALGVA HSKDQKTRSE
ILSMVDNALS KAKAQPDKAY GFIGSDTPSN LMGKQQWKAL VEEAIHSDWV KFRFQAAKNT
WGKVFHNEVF SSIEKEGETF RANQYLFALE QLDATNIFDQ YVIESMIKML ESGELTDPVA
INIAQSSLSQ PSFIRWTTSM LEKHAKVASK LHFEIPEECF IDQPHHTALL CNAIRQSGAE
FGVDNYGRNF QSLEYIQEFR PNYVKLDYLF THNLHDEKQK FTLTSISRTA HNLGITTIAS
RIETQIQLDF LTEHFVEVFQ GFIVDKE
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