| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001002 |
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| Symbol | |
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| ID | 8559315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1136318 |
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| End bp | 1137169 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408673 |
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| Product | transcriptional regulator RpiR family |
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| Protein accession | YP_003288152 |
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| Protein GI | 262396299 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGTTA TCAATAAGAT AGTCGCGAGG CGTACTCAGC TTTCGCAAAG TGGTCGTTTG
GTCGGCGATT GGATTGTTGA AAACGCAGAA AAGGCCGCGC TGCTCACTAG CCAAGAACTT
GCGGCGCAAG TAAAAGTGAG TCAATCGAGC ATTGTGAAAT TTACTCAGCG TATCGGCTTT
AAAGGTTACA GCGAGTTTAA ATTAGCTCTG AATGAAGAGA TTGGCCGTAA GCATGCGATG
CAGTCGACAC CGCTGCACAG TGATATTTTG GCTGACGACC CCATTGCGGT TATTTCACAG
AAACTGGTGA AAGCGAAAAC CGATGCTATG TTTCAAACCA CCAATACGCT GTCTTACGAA
GCGTGTCACC AAGCGGTGAA ATGGTTGAGT GAAGCGCGTC GAGTGGAAGT GGTCGGGATT
GGGGGCTCTG CACTGACCGC GAAGGATTTA AGCTTTAAAC TGCTTAAACT TGGTATTACG
GCGCTTTCTG AACAAGACAG CCACGTGCAG ATTGCTGTTG CCCGCACGCT CTCTCCAGAA
GATGTTCAGA TTGCAATTTC GTTTTCGGGT GAACGCAAAG AAATTCTCGT GGCAGCAGAA
GCGGCAAAAG AGCAGGGCGC GAAGGTGATT GCGTTATCAG CGCCCGGAAG AAGTCGCTTG
CGCGGCATTG CCGATATTAC GTTTGATACC ATCGCCAATG AAATGGAGCA TCGCAGCTCA
TCCATTGCTT CGCGCACCGC GCAAAACGTG ATCACCGATT TGCTGTTTAT CATCTTGGTT
CAGCAAAGAG ACGACAGTGC CCGTCAGTTG ATCAGCGATA TCAGTACCGA CATCAAGCAG
ATCCTCACAT GA
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| Protein sequence | MSVINKIVAR RTQLSQSGRL VGDWIVENAE KAALLTSQEL AAQVKVSQSS IVKFTQRIGF
KGYSEFKLAL NEEIGRKHAM QSTPLHSDIL ADDPIAVISQ KLVKAKTDAM FQTTNTLSYE
ACHQAVKWLS EARRVEVVGI GGSALTAKDL SFKLLKLGIT ALSEQDSHVQ IAVARTLSPE
DVQIAISFSG ERKEILVAAE AAKEQGAKVI ALSAPGRSRL RGIADITFDT IANEMEHRSS
SIASRTAQNV ITDLLFIILV QQRDDSARQL ISDISTDIKQ ILT
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