Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001000 |
Symbol | |
ID | 8559313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1133690 |
End bp | 1135144 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646408671 |
Product | PTS system N-acetylmuramic acid-specific IIBC component |
Protein accession | YP_003288150 |
Protein GI | 262396297 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA TAACTTCAAA CACAGTATCG CAGTTGCTGT CCGCAGTGGG TGGCAGCAGC AACGTAAGCA AATGTGGTAA CTGTATGACG CGTTTGCGTT TATCGCTCGC CAACAATGGC TTGGCTGACC AGTCTGTTAT CAAGCAAATT CCCGGCGTAA TGGGTGTGGT GGAAAGCGAT GAGCAGTTTC AGATCATTCT CGGTCCCGGA AAAGCTCAAC AAGCGGCTGA GATGATGAAT CAATTGATCG ACAGCTTAAC CTCTGGTGAC AGTGAAGAAC CAGATATGCC GCAACAAGAT CTTTCTGCCG TCGCGGCCGA GCAGAAAAAA CAGATGAAGA GCAAACAAAC CAGTGCAGTT CAGCGTTTTT TAAGCAAGTT TGCCACCATC TTTACGCCGT TGATCCCTGG CTTTATTGCC GCTGGTTTGT TGCTAGGTTT TGCGACGTTA TTGGAACAGA TGTTTGTTCT CGACCAGACA CCAAGCCAGT TTATGTTGGA TTTGATCGCC TACATGAAAG TCTTTGGTAA GGGTCTGTTT GCTTTCCTAA GTATTCTGAT TGGTTACAAC GCGCAGCAAG CGTTTGGCGG CTCTGGTGTT AATGGTGCCA TTCTCGCCTC TTTGTTTGTG CTGGGTTACA ACCCAGAGGC GACATCCGGC ATTTACTCTG GCATGAACGA GTTTTTCGGC TTTGCGATTG ATCCGCGCGG CAACATTATC GGCGTACTTT TGGCGGCGAT CATCGGTGCG CAAGTCGAGC GTAAGGTTCG TCAATACATG CCAGATGATC TGGACATGAT CTTAACGTCC GTTATCACTC TATTGATCAT GGGTGCGGTA ACCTTCTTGA TCATCATGCC GATCGGCGGC GAGCTGTTTA AAGGGATGTC TTGGTTGTTC CTCAACTTGA ACGATAACCC ATTAGGCGCT GCAATCTTGG CAGGTTTGTT CTTAATTTCT GTGGTATTTG GCATCCACCA AGGTTTCGTT CCAGTGTACT TCGCATTGAT GGAAGCACAG GGCTTTAACT CGCTATTCCC TATCCTGGCG ATGGCTGGTG GCGGTCAGGT TGGCGCGTCA ATGGCGCTGT ATTTCAAAGC CCAAAAAGAC GCTCTACTGC GCACTCAAGT TAAAGGCGCT ATTATTCCGG GCCTTCTAGG CATTGGCGAA CCATTGATTT ACGGCGTGAC ATTACCACGC GTAAAACCAT TCGTTACCGC TTGTATTGGT GGCGCTGCGG GCGGCTTCTT TATCGGCTTA GTTTCTTACC TTGGCTTGCC AGTTGGTCTT AATACGGTGT TTGGCCCGTC CGGTATCGTG GCGATTCCTC TCATGACATC TGAAAATGGC ATCTTCCCGG GCATGATGGT GTTTGTTGCC GGCCTGCTTA TCTCTTACAT CGTCGGCTTC CTCGCGACTT ACTTCTTTGG CTGCAAAGAC GTCGATTTAA GCTAA
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Protein sequence | MAKITSNTVS QLLSAVGGSS NVSKCGNCMT RLRLSLANNG LADQSVIKQI PGVMGVVESD EQFQIILGPG KAQQAAEMMN QLIDSLTSGD SEEPDMPQQD LSAVAAEQKK QMKSKQTSAV QRFLSKFATI FTPLIPGFIA AGLLLGFATL LEQMFVLDQT PSQFMLDLIA YMKVFGKGLF AFLSILIGYN AQQAFGGSGV NGAILASLFV LGYNPEATSG IYSGMNEFFG FAIDPRGNII GVLLAAIIGA QVERKVRQYM PDDLDMILTS VITLLIMGAV TFLIIMPIGG ELFKGMSWLF LNLNDNPLGA AILAGLFLIS VVFGIHQGFV PVYFALMEAQ GFNSLFPILA MAGGGQVGAS MALYFKAQKD ALLRTQVKGA IIPGLLGIGE PLIYGVTLPR VKPFVTACIG GAAGGFFIGL VSYLGLPVGL NTVFGPSGIV AIPLMTSENG IFPGMMVFVA GLLISYIVGF LATYFFGCKD VDLS
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