Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000988 |
Symbol | |
ID | 8559301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1118531 |
End bp | 1119397 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646408659 |
Product | peptide ABC transporter ATP-binding protein |
Protein accession | YP_003288138 |
Protein GI | 262396285 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGGTA TTAACTTAAA TCATGCATAC CACAATAATC CGGTCATCCA GATCCGAGAT TTATGCGTCG ATTACATCAC CGATAATGGT GATTTCAATG CGGTAAAATC CGTCAGCTTC GATATCGGCA AAGGGGAAGT ATTTGGGCTT GCTGGTGAAT CGGGATGTGG CAAAAGCACG ATCGCATTCT CGATCAATCG TCTCCATAAG CCGCCAGCGT TCATTTCTGG CGGTAAAATA TTGTTTGATG GCAAAGACAT TCTTAGCCTC TCAGATTCTG AGCTAACCGC TCTGAGGTGG AGTGAAATCG CCATGGTGTT TCAAAGCGCG ATGAACTCAC TCAACCCTGT CTTAACGATC CAAGAGCAAT TCGCAGATGT ATTGCGTCAT CACCAAGGAC TCACCAACGC TCAAGCGAAA GATCGAGCAG AAAAACTATT GGACTTGGTC AATATTCCAC GAGAACGGTT AACGGAATAC CCTCACCAAT TTTCAGGTGG AATGCGTCAG CGCTTGGTGA TTGCTATTGC TTTGTCTTTG AACCCTAAGC TGATCATTAT GGATGAGCCC ACAACCGCTT TAGATGTGGT GGTACAAAGA GAGATTTTAC AACAAATCTA TCAGCTTAGA GATGAATTTG GCTTCTCAGT ACTCTTTATT ACGCACGACT TGGCGCTGAT GAGCCAATTG TGTGATCGCA TTGCCATCAT GCGGCATGGA GAAATCGTCG AAGTCAATCA GGCATACGAA ATTCGCAATA ATCCTCAACA TCCCTACACA CAAAAGCTAT GGGCTTCTTT CCCAAACATC CACGATGTCC ACAAACAACC AGAGCAACCA GAGCAACCAG AGCAACCAGG AGCGTAA
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Protein sequence | MDGINLNHAY HNNPVIQIRD LCVDYITDNG DFNAVKSVSF DIGKGEVFGL AGESGCGKST IAFSINRLHK PPAFISGGKI LFDGKDILSL SDSELTALRW SEIAMVFQSA MNSLNPVLTI QEQFADVLRH HQGLTNAQAK DRAEKLLDLV NIPRERLTEY PHQFSGGMRQ RLVIAIALSL NPKLIIMDEP TTALDVVVQR EILQQIYQLR DEFGFSVLFI THDLALMSQL CDRIAIMRHG EIVEVNQAYE IRNNPQHPYT QKLWASFPNI HDVHKQPEQP EQPEQPGA
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