| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000941 |
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| Symbol | |
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| ID | 8559254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1073488 |
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| End bp | 1074636 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408612 |
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| Product | GGDEF family protein |
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| Protein accession | YP_003288091 |
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| Protein GI | 262396238 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.181064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGACAT TGGCTGGAGC ACGCTTAGAG GAAATGGCGG ATATCCGCTC AACAAGAAAA
AAGAAAATTG TCTTTTTATG CTCCAGTATC GCCGCGGCAT GTTTAACTTA TGGCTCCATT
GCTCAATTGT TTGAGGATAA TTGGGGATTA AGCTTTTTCC ATGCTCTGTG TGCCTTAGCC
TGTTTAGGTA TCAGTTATGT GATAAAGGTT CAACGACATC ATCAATATGC CGACCTATGG
CTGAGTGCAG TCTTGATGTT CGAAGGGTTA TTGCTACTTC TGTATAACGA TGCCCCCTCA
GGCAAACTGC TATGGCTATA CCCTATTGTC GCCACTCTGG TGCTGATCAA TGAGTTTAAA
GTCGGTCTGC TGTTTAGTGG CACCTATATC TTACTGATCT TTTTTGGCGT CGTTTTTTTA
GATCGGCTAC CAACAGCCAG TGACATCATA GAACGACGAT TTATGCTGAC CTTGATAGCA
ACTGCATTTG TGTGTCACAC ATTCTCGTAT TACTACACAA AAGTCCTCAA CTACATTCAA
ACACTTTATC GTGAAGGGAT TGAAGAGTTG GCGTATTTTG ACCAACTCAC AGGGCTTGCC
AACCGCTGGA GCTTTGAAAC TTGGGCGCGA GCAAAGCTCG ATGAGATCAA CCATTCATCT
GATGACAGTA TCACTGCTCT GGTCTTCCTT GATATTGATA ACTTCAAACA TATTAACGAC
ACCTACGGAC ACGATATTGG TGACCAAGTG CTTCAAGCCT TTGCAACTCG ATTAAAAAAC
AATGTTCGCC ATAAAGACAG AAAAACCGAC AAACACGACT ACTCCATCGC TCGATTTGCG
GGCGACGAGT TTGTGCTCAT GCTGTACGAC ATAAACAGTA AAGGTGACCT AGACAGCATT
TTGAAGCGTA TTGTGAATCT ATTCCCAAAA GGCTACCGAA GCTACGATAT GATTAACGAG
TTAACGATGA GTGTGGGCGC TGCTATCTAC AAACAAGATG CGAAGGATTT ATCTGAATTG
ACTCGGTGCG CAGATAAAGC AATGTATGCG GCTAAACACA CAGGGAAAAA CCAATACGCG
TATTACGAGC ACTGCAATAC CGAAGAGAAG TCAGCCTCTG AAACGCCGGC TGTGTCAGAA
GCTTGCTAA
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| Protein sequence | MSTLAGARLE EMADIRSTRK KKIVFLCSSI AAACLTYGSI AQLFEDNWGL SFFHALCALA
CLGISYVIKV QRHHQYADLW LSAVLMFEGL LLLLYNDAPS GKLLWLYPIV ATLVLINEFK
VGLLFSGTYI LLIFFGVVFL DRLPTASDII ERRFMLTLIA TAFVCHTFSY YYTKVLNYIQ
TLYREGIEEL AYFDQLTGLA NRWSFETWAR AKLDEINHSS DDSITALVFL DIDNFKHIND
TYGHDIGDQV LQAFATRLKN NVRHKDRKTD KHDYSIARFA GDEFVLMLYD INSKGDLDSI
LKRIVNLFPK GYRSYDMINE LTMSVGAAIY KQDAKDLSEL TRCADKAMYA AKHTGKNQYA
YYEHCNTEEK SASETPAVSE AC
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