Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000935 |
Symbol | |
ID | 8559248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1067226 |
End bp | 1068113 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 646408606 |
Product | LysR-family transcriptional regulator |
Protein accession | YP_003288085 |
Protein GI | 262396232 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0375861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGAG TAACGGCAGC AAAAGTGTTT GTGGATGTGG TGTATTCTGG CAGTTTTACC GCGACCGCCG AGCGGTTAGA CATGTCTCGG CCAATGGTGA CTCGTTATGT AGAGGCGATG GAGAACTGGT TGCAAACTCG TTTGTTGCAC CGCACCACGC GCAAGGTGTC GCTCACCACC GCAGGGGAAC GCAGCTTGCC TCAGATTGAG CGTTGGTTAA AACAGGCCGA TACGTTGACG TCGAACATTG CCGTTGATGG TGAGCTGTCC GGAAAAATCC GTCTCGCGTC TAGCACTTCA TTTGGGGTCT CACAGTTGAT CCCAGCAGTA AACAGTTTTA TGCAAAAGCA CCCCAAAGTG CATATCGACA TAGATCTGCA AGATTCAGTG AGTGATCTAA CCGAGCAACG CATCGATCTG GCAATCCGAA TTGCGTCAGA TCCCGATCCT TCTTTGATTG GTAAGCCGAT TGCGGTGTGT GAATCGGTGT TGGTGGCATC GCCGCAATAC TTGCAAACTC ATCGCGCGAT CGCGCATCCG CGAGATTTAT CTTCACACGA CTGTTTGGGT TACAAAAACT TTGAGCGTCA CGTGTGGCAT TTGTCTCAGG GCGAGCAGTT CGAGTCGGTG GGAATTGAGT GTCGCCTAAC CAGCAATGAG GCCACGGCGT TATTGCATGG TGCTTTGCAA GGCATGGGTA TTTCGATGCT GCCAACCTAT TTGAGCAATA TCTATCTGCA ATCGGGTCAG CTTGAGTCGG TGTTGCCGGA TTGGAAGCCA AATGATCTCA ACATTTACGC GCTATATTCA TCGCGTAAAC ACTTGTCTCC GGCGGTGAGA GCCTTCATCG ATCACAGTGA AGATTACTTT AAACAGCACC ATTGGTAA
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Protein sequence | MDRVTAAKVF VDVVYSGSFT ATAERLDMSR PMVTRYVEAM ENWLQTRLLH RTTRKVSLTT AGERSLPQIE RWLKQADTLT SNIAVDGELS GKIRLASSTS FGVSQLIPAV NSFMQKHPKV HIDIDLQDSV SDLTEQRIDL AIRIASDPDP SLIGKPIAVC ESVLVASPQY LQTHRAIAHP RDLSSHDCLG YKNFERHVWH LSQGEQFESV GIECRLTSNE ATALLHGALQ GMGISMLPTY LSNIYLQSGQ LESVLPDWKP NDLNIYALYS SRKHLSPAVR AFIDHSEDYF KQHHW
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