| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000929 |
|---|
| Symbol | |
|---|
| ID | 8559242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1061742 |
|---|
| End bp | 1062890 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646408600 |
|---|
| Product | S-(hydroxymethyl)glutathione dehydrogenase |
|---|
| Protein accession | YP_003288079 |
|---|
| Protein GI | 262396226 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTG AAATCAAACC TGGTCAAACT CACATCAAAT CCAAGGCAAT GGTTGCATGG
GCCGCTGGCG AACCACTGAA AATGGAAGAA GTGGATGTAC AGCTTCCTAA AGCGGGTGAA
GTGCTAGTGC GCATCGTCGC AACAGGTGTT TGTCATACTG ATGCGTTCAC TCTGTCAGGC
GACGATCCAG AAGGCATCTT CCCTTCGATT CTTGGTCACG AAGGTGGCGG TATTGTTGAA
ATGGTGGGCG AAGGCGTTAC CAGCGTTGAG GTTGGCGACC ACGTGATTCC TCTTTACACC
GCAGAATGTG GCGAGTGTAA GTTCTGTAAA TCGGGCAAAA CCAACCTTTG TCAGGCCGTG
CGTGAAACAC AAGGTAAAGG TCTGATGCCC GATGGTACAA GCCGTTTTTC TATCAACGGT
GAAACCATCT TCCACTACAT GGGTTGTTCT ACTTTCTCTG AGTACACAGT ACTCCCTGAA
ATCTCGCTAG CGAAAGTAAA CAAAGATGCA CCACTTGAAG AAGTGTGTCT GTTAGGTTGT
GGCGTAACAA CCGGTATGGG CGCAGTTATG AATACGGCAA AAGTTGAAAA AGGCGACACG
GTTGCGATAT TCGGTCTGGG TGGTATCGGT CTTTCAGCGA TCATCGGTGC ACGCATGGTG
GGTGCAAGCC GCATCATCGG TATCGATATC AACGAAAGCA AATTCGATCT TGCAAAACAG
CTAGGCGCAA CCGATGTGAT TAACCCACAG AAATTCGATA AGCCTATCCA AGAAGTGATT
GTTGAAATGA CTGACGGTGG TGTTGACTAC TCATTCGAGT GTATCGGTAA CGTAAACGTG
ATGCGTCAAG CACTTGAATG TTGTCACAAA GGTTGGGGGG AATCGGTGAT CATCGGTGTT
GCGGGTGCAG GTCAAGAGAT CTCAACTCGT CCGTTCCAAC TAGTAACTGG TCGTGTATGG
CGTGGCAGCG CTTTCGGTGG TGTTAAAGGC CGCTCTGAGC TTCCAGAAAT CGTAAACCGT
TACATGGCTG GTGAGTTTGG ATTGCAAGAG TTCATTACTC ATACAATGGG ATTGGCTGAC
GTAAACAAAG CGTTTGATCT GATGCACGAA GGTAAGAGCA TCCGTACTGT TATTCATATG
GATCAATAA
|
|---|
| Protein sequence | MTVEIKPGQT HIKSKAMVAW AAGEPLKMEE VDVQLPKAGE VLVRIVATGV CHTDAFTLSG
DDPEGIFPSI LGHEGGGIVE MVGEGVTSVE VGDHVIPLYT AECGECKFCK SGKTNLCQAV
RETQGKGLMP DGTSRFSING ETIFHYMGCS TFSEYTVLPE ISLAKVNKDA PLEEVCLLGC
GVTTGMGAVM NTAKVEKGDT VAIFGLGGIG LSAIIGARMV GASRIIGIDI NESKFDLAKQ
LGATDVINPQ KFDKPIQEVI VEMTDGGVDY SFECIGNVNV MRQALECCHK GWGESVIIGV
AGAGQEISTR PFQLVTGRVW RGSAFGGVKG RSELPEIVNR YMAGEFGLQE FITHTMGLAD
VNKAFDLMHE GKSIRTVIHM DQ
|
|---|
| |