| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000924 |
|---|
| Symbol | |
|---|
| ID | 8559237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1056229 |
|---|
| End bp | 1057026 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646408595 |
|---|
| Product | transcriptional regulator KdgR KDG operon repressor |
|---|
| Protein accession | YP_003288074 |
|---|
| Protein GI | 262396221 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGGG CAACAATGGA AAAGTCGACT CAGCCTGAAG CGGTTTCGTC AGTACTTAAG
GTTTTTCATA TTCTTCAAGC ACTTGGTGAA CAGAAAGCCA TCGGCGTTTC AGAGCTTTCA
CAACGTCTAA TGATGTCGAA AGCGACTACT TACCGTTTTC TGCAAACCAT GAAATCGCTC
GGTTACGTGT CTCAAGAAGG CGAAGCGGAT AAGTACTCTC TAACACTTAA GCTGTTCGAG
TTGGGCGCAA AATCGCTTGA GTACGTCGAT CTGATCGAAC TGGCCGACAA AGAAATGCGC
CACATTTCAG AACAAACCAA CGAAGCCTTG CACCTTGGTG CGCTGGATGA AAATGCCATC
ATTTACATCC ACAAAATCGA CTCTGGCTAC AACCTACGCA TGCAATCGCG CATCGGTCGT
CGCAATCCGC TCTACAGTAC TGCGATTGGT AAAGTGCTGC TTTCTGAGCG CGATGAAAGC
TTCGTTCGTG ACGTACTGAG CGATGTCGAG TTCATTAAGC ACACAGAAAA AACATTGGAA
AACACCGATC AAGTGCTAGA AGAATTGGCG AAAGTGCGCG ATTTCCACTA TGCAGAAGAT
AACGAAGAGC AAGAACCAGG TCTTCGTTGT ATCGCTGCGC CGATTTATGA CCGCTTTGGT
CAAATCATTG CTGGCTTGTC TATCTCATTC CCAACCATCC GTTTCGATGA AGAGAGAATG
GAATATTACG TCGGCTTACT GCATCAAGCA GGTAAAAACA TTTCTGAGCA ATTGGGTTAC
CACGATTACC CGGCATAA
|
|---|
| Protein sequence | MKGATMEKST QPEAVSSVLK VFHILQALGE QKAIGVSELS QRLMMSKATT YRFLQTMKSL
GYVSQEGEAD KYSLTLKLFE LGAKSLEYVD LIELADKEMR HISEQTNEAL HLGALDENAI
IYIHKIDSGY NLRMQSRIGR RNPLYSTAIG KVLLSERDES FVRDVLSDVE FIKHTEKTLE
NTDQVLEELA KVRDFHYAED NEEQEPGLRC IAAPIYDRFG QIIAGLSISF PTIRFDEERM
EYYVGLLHQA GKNISEQLGY HDYPA
|
|---|
| |