Gene VEA_000903 details

Gene Information

• Locus tag: VEA_000903
• ID: 8559216
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: -
• Start bp: 1034070
• End bp: 1034714
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646408575
• Product: outer membrane protein W precursor
• Protein accession: YP_003288054
• Protein GI: 262396201
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3047] Outer membrane protein W

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA CAATCTGCAG TCTAGCAGTG GTTGCTGCAC TCGTGTCACC AAGTGTTTTC 
GCTCATAAAC AAGGTGACTT CGTTCTTCGT GTTGGTGCGG CGTCTGTCGT TCCAAATGAC 
AGCAGCGATA AGATTCTTGG TTCTCAAGAA GAATTGAAAG TGGATTCAAA TACGCAGCTT 
GGTTTGACGT TTGGCTACAT GTTCACAGAT AACATCAGCC TAGAGCTTCT AGCAGCAACG 
CCATTCAGCC ACGATATCTC AACAGATTTG TTAGGTCTTG GTGATATCGC GGACACCAAA 
CACCTTCCAC CAACGCTTAT GGTTCAGTAC TACTTTGGCG AGCCACAAAG TAAGTTCCGT 
CCATACGTTG GTGCAGGTCT CAACTACACC ATGTTCTTTG ATGAGGGCTT CAATAGCACG 
GGTAAAGGCG CTGGTCTTTC AGATCTTAAG TTGGATGACT CATTCGGTCT AGCAGCGAAT 
ATTGGTGTGG ATTACATGAT CAACGATCAA TGGTTCCTCA ACGCTGCTGC GTGGTACGCA 
AACATTGAAA CAGAAGCAAC TTACAAAGCA GGTGGAGCGA AGCAAAAAAC CGACGTCAAA 
ATTAACCCTT GGGTATTTAT GATCAGCGGC GGTTACAAGT TCTAA 

 

Protein sequence

MKKTICSLAV VAALVSPSVF AHKQGDFVLR VGAASVVPND SSDKILGSQE ELKVDSNTQL 
GLTFGYMFTD NISLELLAAT PFSHDISTDL LGLGDIADTK HLPPTLMVQY YFGEPQSKFR 
PYVGAGLNYT MFFDEGFNST GKGAGLSDLK LDDSFGLAAN IGVDYMINDQ WFLNAAAWYA 
NIETEATYKA GGAKQKTDVK INPWVFMISG GYKF