| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000901 |
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| Symbol | |
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| ID | 8559214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1031343 |
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| End bp | 1032833 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408573 |
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| Product | inner membrane component of tripartite multidrug resistance system |
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| Protein accession | YP_003288052 |
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| Protein GI | 262396199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCATC AAATTACGGC AGACAAACGG GGGATTGCCA CCGTCGCCGT GATGCTTTCT
GCCATCATGG TGTTAATCGA TATGACCGTT GCGAACGTGT CGCTATCGCA CATGATGGGC
GCGTTGGGCG CAACGGCAGA CCAAATTACT TGGGTGCTGA CGGGTTACAG CATGGCGGAA
GCGATCTTCA TTCCGATGAC CAGTTTCTGG GTGTCTCGCT TTGGTGAACG CAAAGTCATG
CTGGTTGCCG TGGTCGGTTT TGTGATTGCC AGTGCGCTTT GTGGGCAAGC ACAGTCTCTT
GAAGAGATGG TGCTGTTTCG CATTATCCAA GGCGCTTTCG GCGCGTCGGT GATTCCATTG
GCGCAGTCGA CGTTAGTTCA GATTTATCCG TATGAGCAAA AAGGCAAAGC GATGGCGATT
TTCTCCATCG GCATTTTGCT TGGTCCTATT TTGGGCCCAG TCGTGGGTGG CGTGATCACT
GACAACATCA ACTGGCGCTG GATTTTTTAC ATCAACTTGC CATTCGGTTT GATTTGTACC
TCTTTAATTT ATCGCTATAT CCACATCGAC AACAAATCCA AACCTAACTT TGACTGGTGG
ATCATCGGTT ACATGGCGTT AGGTGTGGGC GCGTTGCAGT TTGTGTTGGA TAAAGGTAAC
GAAGAAGACT GGCTCAACTC ACGCATGATT CAGACGGCGA TATTGCTCGC AGTCATGGGA
TTGGTGATGT GGATTTATCG CAGTTGGAAA ACCAAAAGTC CAATAGCGCC ATTGTGGCTA
CTGAAAGACC GAAACCTTAT GGTCTCGTCA TTGATGATTG CCGTGGTGTC GATGGCGATG
TTTGGTCTGA CGACTCAACA GCCGATGCTG TTGGAAAGCT TGCTGGATTA TCCGGTCTCA
ACCACTGGCT TATTAATGGC ACCGCGTGGG TTGGCGTCAG CGGCGATGTT AATTTTGGTG
ATTAAACTCA ATCCGCAATT CGATCCCAGA ATCAAAATAG TCTTTGGCTT AAGCTGCATC
GGGATTGGTA GTTATTTGAT GACGCAATAC TCACTGCAGA TCGATACATT TTGGATTGTG
ATGCCGAGTA TGATTCAGGG GATGGGGCTT GGTTTAACCT TCTCGACGCT GTCCACCTTG
GCGTATTTAA CGATTCCGAA AGAGCAATCT GTCGCGGCGG CGAGCATTTA CAATCTGTTC
CGTACCATTG GTAGTTCGTT TGGTATTTCT ATCGCCACCA CGTTCCAATA TCGAGATAGT
CAGCAGCAAT GGCATGCGCT GGGAGAGGGT ATTAATCCTT ATAACCCCAA CTTGCATGAC
TGGGCGGCCA ATCAGGGGCT TTCCATTACT GACCCGGTTG CGTTAGACCA ATACCAACAG
ATGTTGCAGC AGCAATCGCA AATGGTCGCG TTTGTGCACA CCTTCCAGCT TGTGGGAGTG
ATGTTCGTGA TCATGATGCC GATGCTAGTT TTCATCCGGT CGCGTGAATA A
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| Protein sequence | MSHQITADKR GIATVAVMLS AIMVLIDMTV ANVSLSHMMG ALGATADQIT WVLTGYSMAE
AIFIPMTSFW VSRFGERKVM LVAVVGFVIA SALCGQAQSL EEMVLFRIIQ GAFGASVIPL
AQSTLVQIYP YEQKGKAMAI FSIGILLGPI LGPVVGGVIT DNINWRWIFY INLPFGLICT
SLIYRYIHID NKSKPNFDWW IIGYMALGVG ALQFVLDKGN EEDWLNSRMI QTAILLAVMG
LVMWIYRSWK TKSPIAPLWL LKDRNLMVSS LMIAVVSMAM FGLTTQQPML LESLLDYPVS
TTGLLMAPRG LASAAMLILV IKLNPQFDPR IKIVFGLSCI GIGSYLMTQY SLQIDTFWIV
MPSMIQGMGL GLTFSTLSTL AYLTIPKEQS VAAASIYNLF RTIGSSFGIS IATTFQYRDS
QQQWHALGEG INPYNPNLHD WAANQGLSIT DPVALDQYQQ MLQQQSQMVA FVHTFQLVGV
MFVIMMPMLV FIRSRE
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