Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000874 |
Symbol | |
ID | 8559187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1005823 |
End bp | 1006554 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646408546 |
Product | oxidoreductase short-chain dehydrogenase/reductase family |
Protein accession | YP_003288025 |
Protein GI | 262396172 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATAAAG TAGTCATCGT TACAGGCGCA AGCCGAGGCA TTGGAGCCGC AACGGCGAAA AAACTGGCCG AGCAAGGCTA TGCCGTGTGT GTTAATTACC GTGCGCAAAG TGAAGCAGCT CACCAAGTGG TCAGAGACAT ACAAGCAAAT GGCGGAAAAG CGATCGCCGT TCAAGCAGAT GTATCTGACG AGCAACAAGT GCTCAACCTT TTCGATGCAA CAGAAAACGC ACTAGGCTCA GTCACCCATT TGGTCAACAA CGTTGGCATT CTATTTACTC AGTCACCGTT GGCGGAAATC AGCTTAGAAC GCTTTCAGAA AGTAATGAAC ACTAATGTGA ATAGCTGCTT TCTCTGTTGT AGAGAAGCGG CGAAGCGATT CAGTACTGGT GGCGCAATTG TGAACGTTTC TTCCGGGGCA TCACGCTCAG GCGCGCCATT TGAATATGTC GATTACGCCA CATCAAAAGG CGCAATGGAT ACCTTAACCA AAGGGCTATC GCTTGAATTG GCAGACCGAA ATATTCGCGT CAATGGCGTT CGACCTGGTT TCATTTACAC CGATATGCAC GCCGATGGTG GAGAACCAAA CCGAGTGGAT AGGCTCAGCC CTCAAATTCC ACTAAAACGG GGCGGTACGG TAGAAGAAGT GGCGAATGCG ATCGCTTGGC TACTCAGTGA TGAAGCTTCT TATGTTACAG GCTCTTTTAT CGATCTTTCG GGCGGTAAGT AA
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Protein sequence | MNKVVIVTGA SRGIGAATAK KLAEQGYAVC VNYRAQSEAA HQVVRDIQAN GGKAIAVQAD VSDEQQVLNL FDATENALGS VTHLVNNVGI LFTQSPLAEI SLERFQKVMN TNVNSCFLCC REAAKRFSTG GAIVNVSSGA SRSGAPFEYV DYATSKGAMD TLTKGLSLEL ADRNIRVNGV RPGFIYTDMH ADGGEPNRVD RLSPQIPLKR GGTVEEVANA IAWLLSDEAS YVTGSFIDLS GGK
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