Gene VEA_000869 details

Gene Information

• Locus tag: VEA_000869
• ID: 8559182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 999871
• End bp: 1000485
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646408541
• Product: thiamin-phosphate pyrophosphorylase
• Protein accession: YP_003288020
• Protein GI: 262396167
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCCT ATCGTTTGTA TTTGGTCACC GACGACCAAC AAGATTTACC CACTCTCAAA 
CACGTTGTAA GAAAGGCGGT AGAAGGTGGG GTTACCATGG TACAGGTGCG CGAAAAACAT 
GGTGACGTTC GTGCATTTAT TGAACGAGCT CAAGCCGTGA AGACGATCCT TGAAGGCACT 
GGCGTCCCGT TAATCATCAA TGATCGTGTT GATGTTGCCC TTGCCGTCGA TGCCGATGGT 
GTTCACCTCG GGCAGTCAGA CATGCCAGCA GAGATCGCTC GTCAATTGAT TGGCCCAAAC 
AAGATCCTCG GCTTATCGAT TGAGACTGAA GATCAACTGG CAGAGGCGGA TTCTCTTCCG 
ATTGATTACA TCGGTTTGAG TGCCATCTTC GCTACACCAA CCAAAACCAA CACCAAAAAA 
CACTGGGGTA TTGAAGGTTT GAAGATGGCG CTGAACACCA CGTCCTTACC AATCGTCGCT 
ATTGGTGGCA TCAACGAAAC CAACATTCCT GCCCTGAGTG CGACAGGTGT ACATGGTTTG 
GCTTTGGTTT CTGCCATTTG TCATGCAGAA AACCCAACCA AAGCAGCAGA GTACTTACTT 
TCTCTGATGG ATTAA 

 

Protein sequence

MNAYRLYLVT DDQQDLPTLK HVVRKAVEGG VTMVQVREKH GDVRAFIERA QAVKTILEGT 
GVPLIINDRV DVALAVDADG VHLGQSDMPA EIARQLIGPN KILGLSIETE DQLAEADSLP 
IDYIGLSAIF ATPTKTNTKK HWGIEGLKMA LNTTSLPIVA IGGINETNIP ALSATGVHGL 
ALVSAICHAE NPTKAAEYLL SLMD