Gene VEA_000867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000867 
Symbol 
ID8559180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand+ 
Start bp998335 
End bp998997 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content50% 
IMG OID646408539 
Productthiaminase II 
Protein accessionYP_003288018 
Protein GI262396165 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC AAGATTTGAT CGACGCTTGC CGCCAAGATT GGCAAGAATA CACTGAGCAT 
GCCTTCGTGC AGCAATTGGC CAAAGGCACG CTGGCTCAAC CTTGTTTTCT GCATTACTTG 
AAACAAGATT TCTTATTCCT AAAACAGTAC GCGCGAGCTT ATGCGCTGGC AATCTACAAA 
GCACGTACGT TAGACGACAT GCGCCGCGCA CTACCAAGTG TACATGCGCT TTTAGATTCA 
GAGATTGCCC ACCATGTTAC CTACTGCGGT CAATGGGGAT TAACGGAATC TGATCTCGAA 
AACGAGCCGG AAGATTTTGG CACGGTGGCT TACACGCGCT ACGTATTGGA TGCGGGAATG 
ACGGGCGACT TAGTTGACTT GTATGCCGCG CTCGCCCCTT GCTCCATCGG CTACGCCGTC 
ATCGGTAAAA TGCTGATTGA AGATGAAAAC ACGGTATTCG AAGGCAATCC TTACGCAAGT 
TGGATTAACT TGTACGGCGG TGAAGAGTTC CAATCAGGCG TGGCAAGTGG GGCCGAACAC 
TTTAACCAGT TGCTGGCTGA AATCGACATC CACAGCCAGC GCGGTCAAAA CCTGATTCAG 
GTCTTCAAAA CCGCAACGCG CATGGAAGTG GCGTTTTGGC AACAAGGTCT AAACGCACAA 
TAA
 
Protein sequence
MKYQDLIDAC RQDWQEYTEH AFVQQLAKGT LAQPCFLHYL KQDFLFLKQY ARAYALAIYK 
ARTLDDMRRA LPSVHALLDS EIAHHVTYCG QWGLTESDLE NEPEDFGTVA YTRYVLDAGM 
TGDLVDLYAA LAPCSIGYAV IGKMLIEDEN TVFEGNPYAS WINLYGGEEF QSGVASGAEH 
FNQLLAEIDI HSQRGQNLIQ VFKTATRMEV AFWQQGLNAQ