| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000829 |
|---|
| Symbol | |
|---|
| ID | 8559135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 954687 |
|---|
| End bp | 955607 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646408494 |
|---|
| Product | agmatinase |
|---|
| Protein accession | YP_003287980 |
|---|
| Protein GI | 262396127 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000138178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATT TGTTTACTAA AAACGATTAT TCGCTTTACT CCAACTCTAT GTCGTTTTTA
CGTCTACCGT ACATTCGTAA TCCGGTATCG GCAGACGCAG ACGTTGTGGT GCTAGGGGTT
CCTCTGGACA TGGCTACATC TGGTCGTCCA GGCGCGCGCA TGGGTCCAGA TGCGATTCGC
CGTGCCTCAG TCAACTTGGC ATGGGAAGGT AAGAAGTTCC CTTGGGACTT CAACGTATTG
GATAAGCTGA AAGTGATCGA CGCGGGCGAT CTCGTGTTTG ACTGTGGTGA TGCGGAAGAT
TTCACTTACC GTCTAGAGGC GGCAACCAGT GAAATTCTAA AAAGCGGTAA AACCATGTTG
GGATTGGGCG GTGACCACTT CATCACACTG CCTATCCTGC GTGCCTACGC GAAGCATCAT
GGTCAAATGG CTCTGATTCA CTTTGACGCT CATACGGATA CCTACGCAAA TGGCAGTTCA
TACGACCACG GTACAATGTT CTACCATGCG CCGAAAGAAG GTTTGATCTC TGCGAAGAAC
TCAGTACAAA TCGGTATTCG TACTGAATAC AAACAGCAAG ATCACGGCTT CAATGTGATT
AATGCGATGC AAGCGAATGA CATGTCGGTG AACGAGATCT TAGAAGAGAT TCGTCGCACC
GTCGCAGACA AGCCAGTGTA TGTTACTTTT GACATCGACT GCTTGGATCC AGCCTTCGCA
CCAGGAACAG GTACACCCGT TTGTGGTGGC TTGAACTCAG ACAAAGCACT GAAGATCATT
CGTGGCTTAG CCGGTATGAA TATTGTGGGT ATGGATGTTG TAGAAGTATC GCCTCCGTAC
GACCACAGTG ATGTTACCGC ATTAGCGGGA GCAACCATCG CGCTAGAAAT GCTTTACGCA
TACGCATCTG GCCGCGAATA A
|
|---|
| Protein sequence | MNDLFTKNDY SLYSNSMSFL RLPYIRNPVS ADADVVVLGV PLDMATSGRP GARMGPDAIR
RASVNLAWEG KKFPWDFNVL DKLKVIDAGD LVFDCGDAED FTYRLEAATS EILKSGKTML
GLGGDHFITL PILRAYAKHH GQMALIHFDA HTDTYANGSS YDHGTMFYHA PKEGLISAKN
SVQIGIRTEY KQQDHGFNVI NAMQANDMSV NEILEEIRRT VADKPVYVTF DIDCLDPAFA
PGTGTPVCGG LNSDKALKII RGLAGMNIVG MDVVEVSPPY DHSDVTALAG ATIALEMLYA
YASGRE
|
|---|
| |