Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000698 |
Symbol | |
ID | 8559003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 807350 |
End bp | 808075 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646408362 |
Product | nudix-related transcriptional regulator NrtR |
Protein accession | YP_003287849 |
Protein GI | 262395996 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0480026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGTAT CTGTCGACAT TATTCCATTC AGGCTATCTG GCTGTGCCGA TAAGGGATTG GAAGTGTTGT TGATTAAACG TTCAAATCCA AATCGGCCAT ACCATGGAGT CTGGGCACTA CCGGGCGGAT TTGTCTTTGA TAAAGACTTA ACCAGTGAAG GCGGACGCCC GGCCGATGAA AACTTTGAGG CGGCGCGTCG CCGAATTTGC CGCGAGAAAA TCCATACTTA CCCTCGTCAC TTTAGTGAAG CTTTTATCGA CGGCGATCCC AAGCGTGATC CAGAAGACTG GAGCTTAAAC ATTACGCACT ACGCCTTGGT CGATCGTAAC AATGTAGAGC AAATCAACAA TGCTGGTGTA CCAGAGTGCC AACTAAAATG GTTTTCGCTA CAAGCTATAC TCAATGGAGA AGAGACCCTC GCGTTTGATC ATCAAAAAAC CATTGAAAAA GCGTGGCAGA AGCTTCGTGC ATCCATTGAA TACACATCGG TTCTTTTGTT TGCATTAGAC AAGGAGTTTT TGGTTGCCGA CATCATTTCT GCTTATCAAG AGTTTGGTAT TGATATTAGC CGAATGACGA TTAAGCGCCG CTTGATAGAT TCAGGCGTAC TAAAACCCAC CAATAAAGTC GCTTCTACCA ACAAAGGCAA AGGTGGAAAA CCCGCAATGG TATATACGCT GACTAGCGAC GAAGTAACCT TTTTTCAAAA CTGTTTGCGT GGATAA
|
Protein sequence | MIVSVDIIPF RLSGCADKGL EVLLIKRSNP NRPYHGVWAL PGGFVFDKDL TSEGGRPADE NFEAARRRIC REKIHTYPRH FSEAFIDGDP KRDPEDWSLN ITHYALVDRN NVEQINNAGV PECQLKWFSL QAILNGEETL AFDHQKTIEK AWQKLRASIE YTSVLLFALD KEFLVADIIS AYQEFGIDIS RMTIKRRLID SGVLKPTNKV ASTNKGKGGK PAMVYTLTSD EVTFFQNCLR G
|
| |