Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000675 |
Symbol | |
ID | 8558980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 784706 |
End bp | 785137 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646408339 |
Product | redox-sensitive transcriptional activator soxR |
Protein accession | YP_003287826 |
Protein GI | 262395973 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.27209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCA GCGTAGGAGA AGTGGCAAAA CGTTCCGGAG TGAAAGTCTC TGCCCTGCAT TTTTATGAAC AAAAAGGACT GATTTCGAGT TGGAGAAATC AAGGCAATCA GCGCCGCTAC CACCGTAGCG TTTTGCGCCG TGTCGCGGTG ATTAAAGCGG CTCAGCAAGT GGGGTTATCG TTAGAAGAAA TCAAACATGC GCTAGATGAG CTGCCGAAAC ATCAAGCTCC GAACAAAGAT CAATGGGAAG TCATGGCGAG CCATTGGCAT GAACAGTTAG AACAAAAGAT TCAAAAACTC AAAGCCTTGC AAAACGATTT GGGTGGATGC ATTGGCTGCG GATGTTTGTC TTTAGAAACC TGCGCGCTGC GAAACCCAGA AGATGTGTTA GGCAAAGACC ACTCGGGTTC TAATTTAACG TTAGAAGAGT AG
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Protein sequence | MEISVGEVAK RSGVKVSALH FYEQKGLISS WRNQGNQRRY HRSVLRRVAV IKAAQQVGLS LEEIKHALDE LPKHQAPNKD QWEVMASHWH EQLEQKIQKL KALQNDLGGC IGCGCLSLET CALRNPEDVL GKDHSGSNLT LEE
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