| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000651 |
|---|
| Symbol | |
|---|
| ID | 8558956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 754882 |
|---|
| End bp | 756141 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646408315 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | YP_003287802 |
|---|
| Protein GI | 262395949 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC CATTACTGCA AGATTTACAA GATCGTGGCT TGATTGCACA GGCCAGCGAT
TTGGAAGAAA TTCAGACACT TCTCTCACAG CCACAAACCG TTTACTGCGG CTTCGATCCT
ACAGCAGGCA GCTTACACAT CGGCCACCTC GTGCCTTTGA TTATGCTTAA GCGCTTTCAA
GATGCCGGAC ACCAGGCTAT AGCCTTGATT GGCGGCGCAA CGGGCATGAT TGGCGACCCA
AGCTTTAAAG CGACCGAGCG CAGTCTGAAC TCAAAGGAAA TCGTCTCAGG TTGGGTTAAC
GACCTTTCTA ATCAAATTCA GCAGTTGATG AATCACCAAC TGGCCAAGCC AATGATCATG
GTGAACAACG CTGACTGGAT GAAAGCGATC AATGTGATCG ACTTCTTCCG CGATGTGGGT
AAGCACTTCT CGATCAATAC CATGATCAAC CGAGAGTCGG TAAAGCAACG CTTGCAACGC
CCTGATCAAG GCATCTCTTT TACCGAATTT AGCTACGCTC TGCTGCAATC GTACGATTTT
GCCGAGCTAA ACCGTCAATA CGATTGTCGT TTGCAAATCG GTGGCAATGA CCAATGGGGA
AACATCGTCG GTGGGATCGA TTTAACTCGT CGTCAAAATG GTGAGCAAGT ATTTGGCTTA
ACTCTGCCGC TGATCACCAA ATCCGATGGC AGCAAATTTG GCAAAACCGA AGGCGGCGCA
GTGTGGCTAG ATCCTAGCAA AACCTCTCCT TACGCCTTCT ACCAGTTCTG GCTTGGCGCA
GAAGACGCCG ACGTTTACCA CTTCTTGCGT TACTACACGT TCTTGAGCTG CGAAGAAATT
GCCAGCATTG AAGCGCAAGA CCAAGCAAGC CAAGGCAAGC CACAAGCACA ACGTATTCTC
GCTGAAGAAA TGACGCGATT TGTTCATGGC GAAGAAGGTC TAGCCAGTGC CGAACGCATC
ACGCAAGCTT TATTCAGCGG TAATATGCAA CAACTGAGTT TGGGTGAATT AAAACAATTG
GAGTTGGATG GTTTACCAAG CATTGAGAGT GCACAACAAG ATTTGGTTGA GCTGCTGGTT
GAGTCGGGTT TAGCAAGCTC GAAACGTGTT GCGCGCGAAC ACATCAGCAA CAACGCCATC
AGTGTAAACG GTGAAAAAGT GTCGGCTGAT AACCCGAGTT TAAGCTTCCC ACTGTTTGAC
CAATACTGGT TACTGCAACG CGGTAAAAAG CACTTCTGCC TCGTAAAGCG TACCGCTTAA
|
|---|
| Protein sequence | MTTPLLQDLQ DRGLIAQASD LEEIQTLLSQ PQTVYCGFDP TAGSLHIGHL VPLIMLKRFQ
DAGHQAIALI GGATGMIGDP SFKATERSLN SKEIVSGWVN DLSNQIQQLM NHQLAKPMIM
VNNADWMKAI NVIDFFRDVG KHFSINTMIN RESVKQRLQR PDQGISFTEF SYALLQSYDF
AELNRQYDCR LQIGGNDQWG NIVGGIDLTR RQNGEQVFGL TLPLITKSDG SKFGKTEGGA
VWLDPSKTSP YAFYQFWLGA EDADVYHFLR YYTFLSCEEI ASIEAQDQAS QGKPQAQRIL
AEEMTRFVHG EEGLASAERI TQALFSGNMQ QLSLGELKQL ELDGLPSIES AQQDLVELLV
ESGLASSKRV AREHISNNAI SVNGEKVSAD NPSLSFPLFD QYWLLQRGKK HFCLVKRTA
|
|---|
| |