Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000628 |
Symbol | |
ID | 8558933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 728982 |
End bp | 729983 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646408292 |
Product | putative transcription regulator |
Protein accession | YP_003287779 |
Protein GI | 262395926 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATATCG TACGAAGTGG CGCTGCCGAT AAATTTGATA GCTTGGTTTC AGAATTAGGT CAGAATCCGC AAGAGATAAT GGCCGCTGTT GGCCTGTCTG CCGCGCAGTT TCGCGATCCC GATACCTATC TCGCCTACCC TAGGTTGGCT GAATTACTGG AAGAAGCGGC TGCTCGTTGT AAGCAACCGT TGTTTGGTGC GTTACTCGCC GAGCGCCAAA ACCTGCAAAG TTTAGGCGAT TTGCCGATGC TGGTTTCTCG TGCTGAAACG GTCGGTAATG CATTGGCGCG GGTGAATGAT TATCTCTATT TGCATTCGTC AGGCGTTACT CTCAACATGA CGCCACAAGA TGATTGGGTA CGATTGTCGC TCAATATTGA TGTGAATAGT GACCGCGGTA TTGCGCAGTT GATGCAGCTC AGTGTGTCAC ACTTAGCCAT GTTTATCGCC AGTTTGCTCG ATATTGAAGC AAGCCACTTC GCGCTACATT TGACTCAACA CGCAACCTTG GAAGTAGAGC AAAGCAAGTT TGCCCAACAG AACAAACTGC GTTTCGGTGA TAAGTTTGAC GGTATCCTAC TTAAAGCGAG TCTGCTTAAC GCTAAGGACC ACCAAGACGA AGACGCACTG GATCGCCACT TTCAACAGCA CCTCAAGTAT TTACAAACCC GCTATCCTAA CAATCTGAGT GATCAAGCAG CGAATATGAT TGGTCGTTTG TTGTCGACGG GAGAATGCAG CGTGGAGCGC GTTGCAAGAG CATTAGACCT GCACCCAAGA ATGCTGCAAA GCAAGTTAAA ACAACAGGAA ACAAGTTATC GACAGTTGTT ACAACAAGTA CGACAGGATT TTGCCGAGCA GCGTTTAAGT GAAAATATTC AGAGTATTAC CGATATCGCG TTGCAACTGG GCTATGCAGA AACTGCGGTA TTCAGCCGCC ACTTTCGCAG TTGGACAGGA AAGTCGCCTA GCCAATGGAG ACTGGAGAAC AGAATAAGTT GA
|
Protein sequence | MYIVRSGAAD KFDSLVSELG QNPQEIMAAV GLSAAQFRDP DTYLAYPRLA ELLEEAAARC KQPLFGALLA ERQNLQSLGD LPMLVSRAET VGNALARVND YLYLHSSGVT LNMTPQDDWV RLSLNIDVNS DRGIAQLMQL SVSHLAMFIA SLLDIEASHF ALHLTQHATL EVEQSKFAQQ NKLRFGDKFD GILLKASLLN AKDHQDEDAL DRHFQQHLKY LQTRYPNNLS DQAANMIGRL LSTGECSVER VARALDLHPR MLQSKLKQQE TSYRQLLQQV RQDFAEQRLS ENIQSITDIA LQLGYAETAV FSRHFRSWTG KSPSQWRLEN RIS
|
| |