| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000611 |
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| Symbol | |
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| ID | 8558916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 708450 |
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| End bp | 709319 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408275 |
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| Product | AraC-type DNA-binding domain-containing protein |
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| Protein accession | YP_003287762 |
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| Protein GI | 262395909 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0208776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCATC AACAAGTTTC CAGAATCAAT GACGTGCTGT TTTACATTCA TCAGGATATT
AGCAGAGAGT TATCGGCTAA AGAGCTAGCA GATGTAGCAG CCTATTCTGA ACAACACTTC
CATCGTATTT TTAAAGACGT GGTAGGGGAG TCTATCCATC AATATATCCG CCGTACAAGA
ATGGAATACG CCGCCAATCA ACTGATGTTT GATACCAGCT CATCGGTGTT AGACATTGCT
AACAAGTGCG GCTTTAGCTC GGTATCTTCT TTTAGCCGAG CGTTTAAAGC AACGTTCGCT
ATGTCACCTG GTGCGTGGAG AAAGCATGAT TTACAAGTCG CAGAAAAACC GTATTTGAAG
GATCCGGAAG TGGCTGCAGG TTATCATCGG GTTGCGAAAC GCGAGTTGCC AGAACCTAAA
ATTATGGAGG TCCCACAACG CTTTGCGGCG TATGTGCGAC ATGAGGGTTA TAGCCGTTCC
ATTCGCAATG CGTGGCTGAT TTTGAAGGCG TGGGCAAGTT CTGAGAATCG GGACTTTTCG
GTTCAATATG GTTTGCATCA CTCCAACCCT GCTTGGGTCG AACTCGACAA GTGTCGTTAT
GTGGCTTGTA TGGCAATTGA TACGCCGCTC AAAGTGCGCG GCGTCGTGAA TCAAATGACG
ATTCCGGGTG GTTTGCATGC CGTCTTTCGC TTAACGGGCG TATATGGTGA GCTTCTTCCT
CAACTCAGTA TGGTACTAGA GAAGTGGTTG CCTAACTCTG GCTTTAAACA GCGTTCTACA
CCCGCTTATG TCCATTATCA TAAAAATCAC TTTCTCAGCC ATGATGAGGC GTTTGAGCTG
GATTTCTATC TACCCATTAG CTTCTTCTAA
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| Protein sequence | MSHQQVSRIN DVLFYIHQDI SRELSAKELA DVAAYSEQHF HRIFKDVVGE SIHQYIRRTR
MEYAANQLMF DTSSSVLDIA NKCGFSSVSS FSRAFKATFA MSPGAWRKHD LQVAEKPYLK
DPEVAAGYHR VAKRELPEPK IMEVPQRFAA YVRHEGYSRS IRNAWLILKA WASSENRDFS
VQYGLHHSNP AWVELDKCRY VACMAIDTPL KVRGVVNQMT IPGGLHAVFR LTGVYGELLP
QLSMVLEKWL PNSGFKQRST PAYVHYHKNH FLSHDEAFEL DFYLPISFF
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