| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000554 |
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| Symbol | |
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| ID | 8558859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 651921 |
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| End bp | 653366 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408218 |
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| Product | transcriptional regulator GntR family/aminotransferase class-i |
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| Protein accession | YP_003287705 |
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| Protein GI | 262395852 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGAT CCAGTTTGTC TTTGATTGAT ATCGGTGACC TGCATTTAAA AGACAGTGAT
GGAACGCGTC AGCAAGCGTT GTTTTTTGCT ATTCGCAAGA AAATTGTTCA AGGATTGTGG
GTGAAGAATG GGAAGTTGCC TTCTACGCGG AAGCTTTCAC AAGCGCTTAA TCTAAGTAGG
AATACCGTGA TTTCTGCTTA CGAGCAGTTA GTGGCGGAAG GTTACTTGAA CAGCCAAAAA
GGTTCGGGTT TTTATGTTGC CGTAGAACTG CCGGAGCAGT ACTTGCCTGA ACCTAATTCA
GTTCAGAGAG ACTCATCACC GAAAACCAAC TTTGACATCA ACCGCGCATT TGCACCGGGT
GTGCCGGATT TGGACGCATT TCCGATGGCG CAATGGCAAA AGTTACTTGC TCGCCACATG
TCCCGCCCCT GCTTGTTGGG GAATCAAGAT ATTCAGGGTA GTTGGGCATT GCGCAGTGCT
TTAGCTGACT ACCTCGCATC AAGTCGCTCA GTGAATTGTT CTCCAGAGCG CATTATTATT
ACCTCTGGGG CACAGCAAGC GTTGTCAATC GCGACGATGG TAGCTCTAAA ACAAGGTGAT
AAGGTTTTGA TGGAGCAACC GGGTTACGCG CAAATGCGGA AGTTGATTCA GTTCCAAAAC
TATCAATTTG AGCCTTTGTT CGTAAGAGAG AAATTAGGCT TTGATGTGGA AGCTGTGACC
TCAAGCGATG CCGATGCGCT GTATATCACA CCAAGTAATC AATATCCGAT GGGGACCACA
CTCAATACCG AGCAAAGAGG AAAGATCATC AACTGGGCGG TCGAGCAATC AAGTTGGATC
ATCGAGGACG ATTATGACAG CGAATTTCAG TTTGCTCATC GTCCCTACAC CAGCTTACAG
GGGCTAGCCG CTCAAATGGG TCGAGATGAG CATGTGTTGT ATGTGGGTTC CTTCAGTAAA
GTGATGTTTA ACGGATTGCG GCTTGGCTAC CTGGTGGTTC CTGAACGTTT AGTAGAGCAA
TGCTTAGTGG TTAAAGATGC GTTAAGTGGT GATTCACCGA CGCACACTCA AGAAGCGTTG
GCAGATTTTA TTACCGAGGG TGGGTTGTTG CGCCATATCC GAAAAATGCG CCGACTATAT
AAAACCAAGC ATGAACAGAT GCATTTATCC ATTCAACAGC ATTTTGGCGA CAGTGTTTGC
GTCGTTAGCC AAGCGGCTGG GCTTCATATT ACGTTGAAAT GGCAAAACGG TATAGATGAG
CTGCGTTTTA CAAAACTGGC AGAGCATGAA GGGATCATAT TGCGACCTTT GAGCTATTAT
GAACATCCAG GTTTCCAAGC ACGTCACTGG CATGGTGCCG TGCTTGGTTA CGGTAATATC
GCGTTAGAGA ACATAGACGC TGGTATCCAA CGTTTAGCCC AAATTTTTCG ACATGGGAAG
CGGTGA
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| Protein sequence | MDGSSLSLID IGDLHLKDSD GTRQQALFFA IRKKIVQGLW VKNGKLPSTR KLSQALNLSR
NTVISAYEQL VAEGYLNSQK GSGFYVAVEL PEQYLPEPNS VQRDSSPKTN FDINRAFAPG
VPDLDAFPMA QWQKLLARHM SRPCLLGNQD IQGSWALRSA LADYLASSRS VNCSPERIII
TSGAQQALSI ATMVALKQGD KVLMEQPGYA QMRKLIQFQN YQFEPLFVRE KLGFDVEAVT
SSDADALYIT PSNQYPMGTT LNTEQRGKII NWAVEQSSWI IEDDYDSEFQ FAHRPYTSLQ
GLAAQMGRDE HVLYVGSFSK VMFNGLRLGY LVVPERLVEQ CLVVKDALSG DSPTHTQEAL
ADFITEGGLL RHIRKMRRLY KTKHEQMHLS IQQHFGDSVC VVSQAAGLHI TLKWQNGIDE
LRFTKLAEHE GIILRPLSYY EHPGFQARHW HGAVLGYGNI ALENIDAGIQ RLAQIFRHGK
R
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