Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000400 |
Symbol | |
ID | 8558706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 454017 |
End bp | 455261 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646408066 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_003287553 |
Protein GI | 262395700 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAAAG GACATTTAGC GACAACGTTG GTGCTATCTT CGGCACTGTT TACTACCGCC ACTTGGGCAA AAGACTCTGT ATTTGTCGGG CAATTGGTCG ACTTTTCTGG ACCAACAGCC TACGTGAGTA AGCCTTATGG TTCTGGCGTG CGAGACGCAT TACGCTGGAT CAACCAAAAC GGTGGCATTA ACGGTACTGA GCTCGAATTT GAAACGGTAG ATATGGCGTA TAAAGTGCCA GTAGCCATTT CCAACTACAA ACGTTGGGTG GCGCGTAAAG ACATGGTTGC GCTACAAGGT TGGGGTACGG CAGATACCGA AGCTCTCATC TCGTTTGTGA CCAAAGACAA AGTGCCAGTG TTCTCTGCCT CTTATTCAGG TCACTTAACC GACCCAACCG GCAAGAACCC AAAAACTGCG AAACCAGCAC CTTATAACTT CTTCTATGGC GCGTCGTACT CAGATGCGTG TCGTGCACTA GTGAAGTGGG CGAAAGAAGA TTGGGAATCA AAGGGCAACC AAGGTGCGCC AAAATTTACC CACATTGGTG ATAACCACCC ATTCCCGAAT GCGCCAAAAG AAGCGTGTGC AGAATATGCT GAAGAGCTTG GTTTTGAGGT GCAAAACCCA GTGGTTGTGT CACTCAAACC GGGGGACTTC AAAGCACAAT GTCTGTCACT GAAAGAGTCT GGCACTAACT ACGGTTACAT TGCCAATATC GGTAGCTCGG TTATCTCACT AGTGAAGTCT TGTAACACGG TTGGGACAGA GTTCCAGTAC ATGGCAAACA TTTGGGGCGG TGACAAGCCA GTGCTTGAAG CGGCGGGTGA CGGCCTTAAA GACTACGTTT TCCCTGGCAT GACGGCGTTT TGGGGAGACG ATAACGAAGG CATGAAACTG GTTCGTGAGA TTTCTAAGCA GTCTGAATCA GAGCCTGGTG AGTTTAGAAC TCACCACTAC ATTCGCGGCA TTTGTTCTGC GTTCTACATG AAAGAAGCGA TGGAGTGGGC AAAAGACAAC GGTGGCATCA CGGGTGAAAA CATCAAGAAG GGCATGTATG TCCATGACAA CTGGGTCCCA CAAGGCTTAG AAGGTGTTTG TGTACCTGCG AACTGGAAAC CGGAAGATCA CCGTGGCACA ACAACCGTGA ACGTGTTTAT GGGTAACAAC AACGGCGGCG CAGTAGATAT TAAGAAAGTA TCTCAGGTGA CATTGTCACG TCGTGACGAT TGGCTAGGTT ACTAA
|
Protein sequence | MNKGHLATTL VLSSALFTTA TWAKDSVFVG QLVDFSGPTA YVSKPYGSGV RDALRWINQN GGINGTELEF ETVDMAYKVP VAISNYKRWV ARKDMVALQG WGTADTEALI SFVTKDKVPV FSASYSGHLT DPTGKNPKTA KPAPYNFFYG ASYSDACRAL VKWAKEDWES KGNQGAPKFT HIGDNHPFPN APKEACAEYA EELGFEVQNP VVVSLKPGDF KAQCLSLKES GTNYGYIANI GSSVISLVKS CNTVGTEFQY MANIWGGDKP VLEAAGDGLK DYVFPGMTAF WGDDNEGMKL VREISKQSES EPGEFRTHHY IRGICSAFYM KEAMEWAKDN GGITGENIKK GMYVHDNWVP QGLEGVCVPA NWKPEDHRGT TTVNVFMGNN NGGAVDIKKV SQVTLSRRDD WLGY
|
| |