Gene VEA_000372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000372 
Symbol 
ID8558678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp421652 
End bp422428 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID646408038 
Product3-hydroxyisobutyryl-CoA hydrolase 
Protein accessionYP_003287525 
Protein GI262395672 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.616977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCAC AAATCAAATT GGAGCGCGAA GCGCACATTG CCAAGCTCAC GATTAGTAAC 
CCGCCAGCAA ACACCTGGAC GCTTGAATCT TTGAATCAGC TAAAAGAGTT GGCGATTGAA
CTCAGTAATG ATCGCTCCAT TTATGCGTTG GTATTAACAG GCGAAGGCGA GAAATTCTTT
TCTGCTGGAG CGGATCTCAA CAACTTTGCA TCCGGCGATA AATCGCAAGC CGCAGATATG
GCGTTCGCAT TTGGTGAAGC CTTTGAAGCG CTGTCTGCGT TCGATGGTGT TTCCATCGCA
GCAATTAATG GTTACGCGAT GGGCGGCGGT TTGGAAGTGG CGATGGCGTG TGACATTCGC
ATCGCAGAAG AACAAGTACA AATGGCACTT CCTGAAGCAT CGGTAGGTTT GTTGCCGTGT
GCGGGAGGGA CACAAAACCT GACCGCGTTG GTAGGTGAAG GCTGGGCGAA GCGTATGATT
CTATGTGGCG AACGAGTGAC GGCCGAGCGA GCGGAAAAAA TTGGGTTAGT CGAAGAGGTG
GTGGCGAAAG GTCAAGCACT CGAAGCGGCT ATGGAGCTAG CACAGCGTGT TGCGGGCCAA
TCACCGAAAT CCATTTCTGC GTGCAAAGCG CTCATTCAAG GTCGACGCAG CCAAACTCAC
GCGGCTGGGT TGGTTTTAGA GCGTGAACTG TTTTTACAGC TGTTCAATAC ACAAGATCAG
ACTGAGGGTG TGAATGCGTT TTTGCAAAAG CGCAAGCCAC AATGGACAAA CAGCTAG
 
Protein sequence
MTAQIKLERE AHIAKLTISN PPANTWTLES LNQLKELAIE LSNDRSIYAL VLTGEGEKFF 
SAGADLNNFA SGDKSQAADM AFAFGEAFEA LSAFDGVSIA AINGYAMGGG LEVAMACDIR
IAEEQVQMAL PEASVGLLPC AGGTQNLTAL VGEGWAKRMI LCGERVTAER AEKIGLVEEV
VAKGQALEAA MELAQRVAGQ SPKSISACKA LIQGRRSQTH AAGLVLEREL FLQLFNTQDQ
TEGVNAFLQK RKPQWTNS