Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000372 |
Symbol | |
ID | 8558678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 421652 |
End bp | 422428 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 646408038 |
Product | 3-hydroxyisobutyryl-CoA hydrolase |
Protein accession | YP_003287525 |
Protein GI | 262395672 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.616977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCAC AAATCAAATT GGAGCGCGAA GCGCACATTG CCAAGCTCAC GATTAGTAAC CCGCCAGCAA ACACCTGGAC GCTTGAATCT TTGAATCAGC TAAAAGAGTT GGCGATTGAA CTCAGTAATG ATCGCTCCAT TTATGCGTTG GTATTAACAG GCGAAGGCGA GAAATTCTTT TCTGCTGGAG CGGATCTCAA CAACTTTGCA TCCGGCGATA AATCGCAAGC CGCAGATATG GCGTTCGCAT TTGGTGAAGC CTTTGAAGCG CTGTCTGCGT TCGATGGTGT TTCCATCGCA GCAATTAATG GTTACGCGAT GGGCGGCGGT TTGGAAGTGG CGATGGCGTG TGACATTCGC ATCGCAGAAG AACAAGTACA AATGGCACTT CCTGAAGCAT CGGTAGGTTT GTTGCCGTGT GCGGGAGGGA CACAAAACCT GACCGCGTTG GTAGGTGAAG GCTGGGCGAA GCGTATGATT CTATGTGGCG AACGAGTGAC GGCCGAGCGA GCGGAAAAAA TTGGGTTAGT CGAAGAGGTG GTGGCGAAAG GTCAAGCACT CGAAGCGGCT ATGGAGCTAG CACAGCGTGT TGCGGGCCAA TCACCGAAAT CCATTTCTGC GTGCAAAGCG CTCATTCAAG GTCGACGCAG CCAAACTCAC GCGGCTGGGT TGGTTTTAGA GCGTGAACTG TTTTTACAGC TGTTCAATAC ACAAGATCAG ACTGAGGGTG TGAATGCGTT TTTGCAAAAG CGCAAGCCAC AATGGACAAA CAGCTAG
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Protein sequence | MTAQIKLERE AHIAKLTISN PPANTWTLES LNQLKELAIE LSNDRSIYAL VLTGEGEKFF SAGADLNNFA SGDKSQAADM AFAFGEAFEA LSAFDGVSIA AINGYAMGGG LEVAMACDIR IAEEQVQMAL PEASVGLLPC AGGTQNLTAL VGEGWAKRMI LCGERVTAER AEKIGLVEEV VAKGQALEAA MELAQRVAGQ SPKSISACKA LIQGRRSQTH AAGLVLEREL FLQLFNTQDQ TEGVNAFLQK RKPQWTNS
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