| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000222 |
|---|
| Symbol | |
|---|
| ID | 8558527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 240103 |
|---|
| End bp | 241236 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646407887 |
|---|
| Product | fructose-specific phosphocarrier protein HPr/PTS system fructose-specific IIA component |
|---|
| Protein accession | YP_003287375 |
|---|
| Protein GI | 262395522 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
|---|
| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAGC TAAATAAGAA CGACATTACC CTCTCGCAAT CAGCGACAGA TAAGTTTGCA
GCAATCAAGA ATATTGCGCA AAGCCTGACA GACAAAGGCC TTGTTGAACA AGGTTATGTG
GAAGGCATGC TAAACCGTGA AAACCAAAAC TCTACGTTTT TGGGGAACGG TATTGCCATC
CCGCACGGCA CGACTGACAC TCGCTCAATG GTGAAAACAA CGGGTGTTGC TGTGCACCAC
TTTCCACAAG GTGTCGACTG GGGTGATGGT AACACGGTAT TCGTCGCTAT CGGCATTGCA
GCTAAATCTG ATGAGCACCT TGGCATTCTT AAACAGCTAA CGAAAGTGCT AGGCGCTGAC
GGCGTAGAAG AACGCCTACG TAATGCAAAA AATGAAGACG AGATTATTGC CCTGCTCCAC
GGTGATGTTC AGCTTGAAGC AGACTTTGAC GCTTCTTTAA TTCAACTTAT GTTCCCTGCG
AGCGATATGC TACAAATGAG TGCTGTTGCT GGTGGTCTTT TGAAAAACAC GGGCTGTGCT
GATAACGAGT TCGTCGCAGA TCTCGTTACC AAAACACCAA CTCACTTAGG TAATGGCCTT
TGGTTAATTG GCAGTGACAA ACATGTAACT CGCACAGGCG TGTCATTTGT CTCGACGGCA
AACGACTGCG AATATGAAGG TCAAAAAGTG CGTGCACTTG TCGCGTTTGC GGCATGTAAC
AATGCTCACC AGCCTATCCT AAAAACGCTT TCTCATATTG TGTTTAACAA TGAGCACGGC
AAGCTTTTAG ATGCATCAGT AGAACAGATT CTTGCTTTGT TTAAAGGTGA AGAAGTCACA
GCCGCATCTT CAGAAGAAGG CAATACCGCT GTATTTAAAA TCAAAAACTC TCATGGTTTA
CATGCTCGTC CGGGTGCAAT GTTAGTGGCG GAAGCGAAAA AATTTGAATC CACCATTCGC
GTTGCCAACC TAGACGGTGA TGGCAAAACA GTAAACGCGA AGAGCCTAAT GAAAGTCATT
GCGCTTGGCG TTAAGCACGG TCATCAACTT CAATTTACTG CGGAAGGCCC TGATGCACCG
CAAGCCTTGG AGTCTATCGG GAATGCTATC GCTTCTGGCC TTGGTGAAGG TTAA
|
|---|
| Protein sequence | MLKLNKNDIT LSQSATDKFA AIKNIAQSLT DKGLVEQGYV EGMLNRENQN STFLGNGIAI
PHGTTDTRSM VKTTGVAVHH FPQGVDWGDG NTVFVAIGIA AKSDEHLGIL KQLTKVLGAD
GVEERLRNAK NEDEIIALLH GDVQLEADFD ASLIQLMFPA SDMLQMSAVA GGLLKNTGCA
DNEFVADLVT KTPTHLGNGL WLIGSDKHVT RTGVSFVSTA NDCEYEGQKV RALVAFAACN
NAHQPILKTL SHIVFNNEHG KLLDASVEQI LALFKGEEVT AASSEEGNTA VFKIKNSHGL
HARPGAMLVA EAKKFESTIR VANLDGDGKT VNAKSLMKVI ALGVKHGHQL QFTAEGPDAP
QALESIGNAI ASGLGEG
|
|---|
| |