Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000190 |
Symbol | |
ID | 8558495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 205301 |
End bp | 206935 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407855 |
Product | ATP-dependent endonuclease |
Protein accession | YP_003287343 |
Protein GI | 262395490 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0284428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTAG AACGCATCGA AATCTCCGGG TTTAGAGGCA TCAAACGCCT TTCACTCTCT TTTGACGAAC TCACTACGCT CATCGGTGAG AACACGTGGG GCAAATCATC ATTGCTCGAT GCCCTTTCTA TCGCGCTACC TGCTAATGGC TCATTGTATC AATTCGAATT AAAAGATTTT CACGTTGATT ATTCAATTTC TCATCCACAA ACCCAACACT TGCAGATCAT TGTTTGCTTT AAAGCACAAG ACAAGAACGA AGTAAAAGCT GGGCGTTATC GACGGATAAA ACCTGCATGG TGCACAAACG AGGATGGTGA GCAGGTCATT TACTATCGAA TTAGTGCGTC TCGCGACGAG TATGATATTA AAACTGAATA CGCATTTTTG GATCATAACG GTAAGCCGAA GAAACTGCAC CACTCTGAGA AACTCGCCGT AGAGTTGATG ACTCTTCACC CTGTTATCCG CCTACGAGAC TCCCGACGCT TTCCAGATCT AAACCACGTC AACGGCGACA GCAAAAATGC TAGGATTGAA AAACGAATCA ATAACACCTG TCGACGGCTA TTGGCGATGC CTGGGCACGT AAACAAGGGT GAGATTCGCA GTAGTCTCGA TTCAATGCAA ACACTTGTCG AACACTATTT TGCGTTCCGC AGCGTCAGCA AAGGTAACCC ACGAAAACCT CGTGATGGTC TTTTTTATAC AAGCCCTTCC TCTGATAAAG GATTAAGTCA ATTCCTTAAG GAAACAAATG ATAAACAAAG CCGCTTGCTT TTAATGGGGC TTCTCAATGC TTACCTTCAA GCAAAAGGCC CTACCGATTT AAGACGCTGC GCAAGACCTA TACTGATCAT CGAAGACCCG GAAGGCCGAC TACACCCAAC TCATCTCGCT AGAGCGTGGT CATTATTGCA GTTGTTGCCA ATGCAAAAGA TTTTAACTAC CAACAGCGGT ACGTTACTTG GCTCGGTTCC ACTTTATTCA ATCCGGCGTT TGATTCGCTT GTCAGACCGA ACCATTGCCA AGAGCTTAAA CTCTGCCAAG TTTGGTAGAG ATGAGTTACG CCGAATTGGT TTTCACATTC GTTTTCATCG CTCAGGGGCG TTGTTTGCAC GGTGTTGGTT GCTCGTAGAA GGCGAAACTG AAGTTTGGTT ATTTCATGAA TTGGCTCGTC AATGTGGATA TGACTTAGCT GCGGAAGGAG TTCAAATCGT TGAATTTGCA CAGTCAGGAC TGAAGTCACT GATCAAAGTA GCAAAAGAGT TCGGTATCGA CTGGCATGTT GTTACCGATG GTGACCCGGC AGGTAAAAAG TACGCGCATG CCGTGAGAGC GCAACTCGAT CATGATCAGG AAAGGCATAG ACTTACAGAG TTACCTGATC GAGATATAGA ACATTTTCTA TATAATCATG GGTTTGAACT TTTCTTTAAG GACATCATCA AAGTTCCTCA TGATCACCCT ATTCCAGCTA AAAAAGTCGT AAACCGTGTT TTGAAAAAGC ATGCAAAACC GGACTTAGCT TTGGCCATTG TATCTCACTG TGAAGAGAGA GGTATGGAGT GCATTCCTGT ACTTCTGCGT TGGACACTTA AGCGCGTTGT CACCATGGCA AACGGTAATA CATGA
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Protein sequence | MRLERIEISG FRGIKRLSLS FDELTTLIGE NTWGKSSLLD ALSIALPANG SLYQFELKDF HVDYSISHPQ TQHLQIIVCF KAQDKNEVKA GRYRRIKPAW CTNEDGEQVI YYRISASRDE YDIKTEYAFL DHNGKPKKLH HSEKLAVELM TLHPVIRLRD SRRFPDLNHV NGDSKNARIE KRINNTCRRL LAMPGHVNKG EIRSSLDSMQ TLVEHYFAFR SVSKGNPRKP RDGLFYTSPS SDKGLSQFLK ETNDKQSRLL LMGLLNAYLQ AKGPTDLRRC ARPILIIEDP EGRLHPTHLA RAWSLLQLLP MQKILTTNSG TLLGSVPLYS IRRLIRLSDR TIAKSLNSAK FGRDELRRIG FHIRFHRSGA LFARCWLLVE GETEVWLFHE LARQCGYDLA AEGVQIVEFA QSGLKSLIKV AKEFGIDWHV VTDGDPAGKK YAHAVRAQLD HDQERHRLTE LPDRDIEHFL YNHGFELFFK DIIKVPHDHP IPAKKVVNRV LKKHAKPDLA LAIVSHCEER GMECIPVLLR WTLKRVVTMA NGNT
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