Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000171 |
Symbol | |
ID | 8558476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 186350 |
End bp | 188005 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407836 |
Product | isopentenyl-diphosphate delta-isomerase |
Protein accession | YP_003287324 |
Protein GI | 262395471 |
COG category | [R] General function prediction only |
COG ID | [COG3044] Predicted ATPase of the ABC class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.358983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGT TGACTGCCAC GCTTAAGAAA ATTGAAAAGC AGAACTACCG CGCTTATCAG CAAATCAAAG GTCAATACGA CTTCACTGAT TTCACTTTGT TCATCGATCA CGTACAAGGA GATCCGTATG CTTCCGCGTC ACGTTTTCGT GCAACTCGCG CCTGGTCCTT GACTGGTCTG GAATGGTTAA AAGACGAGTC CCCTGCTTTT CAACGAGCAG CACGTGATTT TATTGCGCGC AGTTTTGAGC TGTTTGCTAA ACAAGAAAAC TCCGTATCCA TTTCATTGAA TGGCCAAACT GTGTTGGATA GCACCGCAGT ATTGTTTACC GAGGAAGGTA TTGAACTGCG TTTTCGAGTT AACTTGCCTG CTGAAGGTCG TTCAGTGTTG GGGAAAAAAG CCAACAACAT ACTGACTTTC CATTTGCCTA AGTTTATCCG TCGAGCGACC TTAGAACGTG AACTCGACAA AGCAGCATTG ATTGAGCATT GCCAAGTTGT TGAAGACCAA GACGCCCTGC GTGCACAGTT GGAAGCCAAT AACCTAGTTG CGTTTGTCGC AAATGGCAGC ATTCTTCCTC GAATTGCTGG CAACTGTGAT CTCCCAATGA AAGAGGCGGT TGAGTTCAAG GCCCCTGAAT CGCTGCAAGT GACTTTACAT GCACCAAACA AAGGCCATGT CACGGGATTA GGGATTCCAA AGGGCATTAC GCTAATCGTT GGTGGCGGTT TCCACGGTAA ATCTACCTTA CTGAATGCGA TTGAGCGTTC GATTTACGAC CATATTCCAG GAGATGGTCG TGAATACATC GTAGCTGATG ACAAGGCAAT GAAGATCCGC GCCGAAGATG GTCGATGCGT GCATCATTTG AACCTGTCGA ATTACATCAA CCATTTGCCA ATGGGTAAAG ATACAGCGGA CTTTTCGACT CAAGATGCAT CAGGCTCAAC ATCACAAGCC GCTTGGCTTC AAGAGTCTAT TGAAGCGGGT GCGAGCACGT TATTGATTGA TGAAGACACC TCTGCGACGA ACTTCATGAT TCGAGATGAA CGTATGCAGG CATTGGTGGC AAAAGGTGAT GAACCAATTA CCCCTCTTGT CGATCGCATT GGTCAATTGC GAGATGATCT CGATATCTCT ACCATTATCG TTATGGGTGG TTCAGGCGAC TACTTAGACG TTGCCGACAC AGTCATTCAG ATGCACGACT ACCAAGCGGT TGATGTGACA GAAAAAGCGA AAGAAGTGAT CGCTCAGCAC CCTACTCAAC GTCATAACGA ATCGGAAGAA CGCTTACAAA CCTTCCCGCC TCGCGCCCTG AATCGCGTTG CTTTGATGAA TATTCTCACT GACGGTAAAT TCCGTGTGAA TGCGAAAGGC AAAGAGTCAC TTCGATTTGG CAAAGAGTTT ACTGACCTTA GCGCTTTGGA ACAGATTGAG TCCGCTGATG AAGTCAACAC GATTGGCTGG TTATGGTTCC AAATCGCTCA GCTTCCAGGC TGGTGTAATC ATCCAGCGAA AGAAATTGAA GAAATGCTGT CTGGTGAGTG GCATGCATCG CTTCCTAAGC AAGGGGACTT AGCCAAACCA CGCACACTAG ACGTAATGGC TGCGCTTAAT CGCATGAGAA AATCTCAGTT TAAGCCTTCA TGCTAG
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Protein sequence | MDQLTATLKK IEKQNYRAYQ QIKGQYDFTD FTLFIDHVQG DPYASASRFR ATRAWSLTGL EWLKDESPAF QRAARDFIAR SFELFAKQEN SVSISLNGQT VLDSTAVLFT EEGIELRFRV NLPAEGRSVL GKKANNILTF HLPKFIRRAT LERELDKAAL IEHCQVVEDQ DALRAQLEAN NLVAFVANGS ILPRIAGNCD LPMKEAVEFK APESLQVTLH APNKGHVTGL GIPKGITLIV GGGFHGKSTL LNAIERSIYD HIPGDGREYI VADDKAMKIR AEDGRCVHHL NLSNYINHLP MGKDTADFST QDASGSTSQA AWLQESIEAG ASTLLIDEDT SATNFMIRDE RMQALVAKGD EPITPLVDRI GQLRDDLDIS TIIVMGGSGD YLDVADTVIQ MHDYQAVDVT EKAKEVIAQH PTQRHNESEE RLQTFPPRAL NRVALMNILT DGKFRVNAKG KESLRFGKEF TDLSALEQIE SADEVNTIGW LWFQIAQLPG WCNHPAKEIE EMLSGEWHAS LPKQGDLAKP RTLDVMAALN RMRKSQFKPS C
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