| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000093 |
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| Symbol | |
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| ID | 8558398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 106092 |
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| End bp | 106922 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646407758 |
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| Product | formate dehydrogenase chain D |
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| Protein accession | YP_003287246 |
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| Protein GI | 262395393 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.257578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATGTA CTACTCAATC TTATTTTGAA CTGTCCGATT TCAATCAAGC ACCACCTCAA
CCAAGTGCAT TCAATTACCG AGAATTGATT GATGGCCGCC CAGTGCAACA AATGTCGCTG
GCGAGTGAGT CAGCTTTAGC TATCAGCTAC AACGGCATTA GCCAAGCGGT CATGATGGTG
ACGCCAGGCC ATCTGGAAGA CTTCGTGAAA GGATTTAGCC TAAGCACAGG CATCGTCCAC
GACTTCAAAG AGATCAAAGA CATTGAAATT GGTGGCGATC ACGAATCTTA CTATGCGGAA
GTGGAAATCA GCAACCGCGC TTTCTGGGCG TTAAAAACAC AACGCCGAAA TCTTGCTGGC
ACAACCGGAT GCGGCATTTG TGGCGTCGAG GCTCTTGAAC AAGCTTTGCC TGATTTGGTG
CCACTGACAC CGTCTCTTCC TCCGCGCTCC GATGTATTCG AAGGGCTGCG AGACAAAGTC
GCACAGCATC AAGAAGCCGC ACGTGAATCT GGCGCGTTAC ACGCCGCTTT ATTTGCAGAT
TTACAAGGCA ACATCAAGTT GTGCCGAGAG GACATCGGCC GCCACAACGC GCTAGATAAG
TTGATTGGCG CATTGGCCAA CAATCACATC GAACCTCAAA GTGGCTTCGC AATCATGACA
AGCCGTTGCA GCTTAGAGTT GATCCACAAA GCCGTTCGCG CGCGCATCCC CACACTGGTT
TGCTTATCTG CACCTACAGC GTTAACCGTC GAATGGGCAA GAAGAAACCA TTTGAACCTA
ATTCACTTGC CAAAACACGG CTCGCCGCGT CTATACAGCC CTGCGCCTTA A
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| Protein sequence | MRCTTQSYFE LSDFNQAPPQ PSAFNYRELI DGRPVQQMSL ASESALAISY NGISQAVMMV
TPGHLEDFVK GFSLSTGIVH DFKEIKDIEI GGDHESYYAE VEISNRAFWA LKTQRRNLAG
TTGCGICGVE ALEQALPDLV PLTPSLPPRS DVFEGLRDKV AQHQEAARES GALHAALFAD
LQGNIKLCRE DIGRHNALDK LIGALANNHI EPQSGFAIMT SRCSLELIHK AVRARIPTLV
CLSAPTALTV EWARRNHLNL IHLPKHGSPR LYSPAP
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