Gene VEA_000069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000069 
Symbol 
ID8558374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp81742 
End bp82065 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content46% 
IMG OID646407734 
Productnitrite reductase [NAD(P)H] small subunit 
Protein accessionYP_003287222 
Protein GI262395369 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTG AAAAGATTTG CCAAATCAGC GACATCGTAC CGGGCACTGG CGTTTGTGCT 
TTGGTTAATG GTCAGCAAGT TGCGGTATTT CGCCCAACAG AAGCGGAAGA AGTGTTTGCC
ATCAGCAACA AAGACCCATT CTTCCAATCA AACGTGCTTT CTCGCGGTTT GATTTGTGAG
CACCAAGGCG AACTTTGGGT AGCAAGCCCA CTTAAAAAGC AACGCTTTAA CCTGACAACA
GGTGCGTGCA TGGAAGACGA GCGTTTTAAC GTGAAAGCGT ACAAAACACG CGTAACCAAC
GGTGAAGTAG AAATTTCTGC ATAA
 
Protein sequence
MSFEKICQIS DIVPGTGVCA LVNGQQVAVF RPTEAEEVFA ISNKDPFFQS NVLSRGLICE 
HQGELWVASP LKKQRFNLTT GACMEDERFN VKAYKTRVTN GEVEISA