Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000050 |
Symbol | |
ID | 8558351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 55542 |
End bp | 56444 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646407711 |
Product | transcriptional regulator LysR family |
Protein accession | YP_003287203 |
Protein GI | 262395350 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.385466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAATA CCGACGATTA CATCATTTTC TATCACCTGA TCGAGCAAGG CTCATTCAGT GCTGCTGCAA GACACATGTC ATTGACCAAA TCGGTTGTCA GTAAACGCAT CGCCAAGCTT GAGCAAGAGC TTGGTGTACA GCTTCTTTAC CGAACAACGC GAACGTTAAC GTTGACGGAG GCAGGGCGAG CGTTCTTTAC TCATGCAAAA GCCGTTTATC AAGCGGTGGC AACGGCAGAA GAATCCATTG TGGGGTTGGG TAAGAATTTA TCTGGAAACA TTAAAGTTTC TGTACCCACT ATCTCTGGTG AGTTAATTCT TCCTCAAGTG ATCAATGAGT TTAATCAGAA ATACCCTGAC ATCAATATCG ACATGGATCT TGATAATCGT TTTGTCGATA TTGTGAATGA ACGCTTTGAT TTGGCCATTC GAACGGGAGT GTTGCCAGAT TCTAGCCTGA TCGCAAGAAA GCTGGTGGAT GCCAATTGGA TTGTTTGTGC GTCACCTCAA TACCTTGCTA AACATGGCAT ACCTAAACAA CCTCAAGCCT TGGATAAACA CAATTGTTTA GTCTATTCTT ACCAAGAAAC CGGAGCGCAT GAGTGGGCGT TTAAAGATGG AGACGAGGTA TATCAAATCA CCGTCGACGG TAACCTCTGT ACCAACAATT CTTCTGTATT GAGAAATGTG GCGTTGTTAG GGCAGGGAAT CATCTATGTA CCGCGTGTCT TGGTTTATGA AGACTTAAAG CAAGGCCGCC TGATTCAATT GTTCAAAGAT GAAACCGCCA AATGTTTGGG TATTTATGCA GTGTATCCTT ACACTCGTCA ACAGCCAGAA AAAATTAAGA TCTTCATTGA TCATCTATAC ACGAGCTTTC AAAGTCAAAA TCATCGATTT TAA
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Protein sequence | MRNTDDYIIF YHLIEQGSFS AAARHMSLTK SVVSKRIAKL EQELGVQLLY RTTRTLTLTE AGRAFFTHAK AVYQAVATAE ESIVGLGKNL SGNIKVSVPT ISGELILPQV INEFNQKYPD INIDMDLDNR FVDIVNERFD LAIRTGVLPD SSLIARKLVD ANWIVCASPQ YLAKHGIPKQ PQALDKHNCL VYSYQETGAH EWAFKDGDEV YQITVDGNLC TNNSSVLRNV ALLGQGIIYV PRVLVYEDLK QGRLIQLFKD ETAKCLGIYA VYPYTRQQPE KIKIFIDHLY TSFQSQNHRF
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