Gene VEA_000048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000048 
Symbol 
ID8558347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp51788 
End bp53449 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content45% 
IMG OID646407707 
Productputative regulator protein 
Protein accessionYP_003287201 
Protein GI262395348 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.59899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA CCTTATTTGC CTCAAATGCC GAAAAAGCGC TTCTCTCAGA ACGCATCAAC 
AAGTTGGCTA AAGCGTTAAC GGATGGCGTT TATGAACGCG AACATACCAT CAAGCTCTGC
CTCCTTGCGG CACTTGCTGG TGAAAGTGTT TTTCTTTTAG GCCCACCTGG CATTGCAAAA
AGCTTAATTG CCAAGCGACT TATCCAAGCG TTCGATAATA GCAGTTACTT TGAATACCTG
ATGACGCGAT TCTCAACACC TGAAGAAGTT TTTGGGCCAC TGAGTATTCA AGAACTCAAA
GATAACGGTC GTTATGTTCG CTTAACTAAA GGGTATTTGC CAACCGCACA AGTCGTATTT
TTAGATGAAA TCTGGAAGGC GGGCCCCGCC ATTCTGAATA CATTGCTGAC AGTGGTCAAT
GAGAAAACGT TCAAAAATGG CAGCGATATT GAGCGTGTGC CAATGCGTTT GTTGGTATCG
GCGTCCAATG AACTGCCAGA TGAAGACAGT GGTTTGGATG CACTTTACGA CCGCATGTTG
GTGCGCGTGT TTGTGAATCG AATTCAGAAT AAACAAAACT TTAAGTCGAT GTTGACGGTA
GGCACGTCAC AAGAGGCACA AGTGCCAGAA GGGCTAGCAA TAACAGATGA AGAGTATCAT
CAATGGCAAC AGCAGCTCGA CAAGCTGACG TTAACCGATA ATGCATTCGA GAAGCTTTTC
CAGCTTAAAA CGATGTTAGA AAGCAAGGTC GAAGCTCAGT TTGGCGATGT CGCCAATACC
GACATGTATG TCTCTGACCG CCGCTGGAAG AAAGCCGTGA AATTGCTAAA AGCGAGCGCG
TTTTTTAATG GACGCGATGA AATCAACCCA CTTGACCTTC TGCTGCTGCA AGATTGTTTA
TGGAACAGCC CTGAATCGCG AGACGTGGTA CGCGAAGTGG TCCAAGAGTT CGCCCTAAAA
CATGCATTTG ACCAACAAGA CGCCGAACAG GAAATTGAAT ACTGTCGCGA GTCTTTGGTC
GATGTTCAGC ATGAGCTTGA AGATGCCTAC CGCATGACGT TAACGTCTGA AGCGGCAACG
GGTATTCTGC GCAAAGAAAC CATGCGTTTT GATACCTCTA AAGCTAAGAC CTACAAAGTT
GGCGCAGCCG TTAACTTAGT TAAACTGGTT ATTTTGCAAA GCAACATGTC GGTTTCAGAG
TCAGAGAAAG GCGATAGCCG CTGGGTTTAC GTGCCAAAAG ATGAACTAGA CCGAGTCATC
AAAGAGGGAC ACGGTGATGT GTATGGCTAC GTCAATCAAA ACACCAACAT GTGCCGTTTA
CGATTTGATG TTGATGCCGC AAATAACCTA GTTATCCGTG ATATCGCAAA CCGAGGCATT
CTGGTGAGCT TAGTGACTCA AGAGGGCTTG GATGTAGAGC TTTACCAAAA GTGGTTAACG
CAGAGTGAAA AAGCCGTAAA TCAACTCAGT GAAGCAGAGC ACCATATGCG CAAGGTAAAA
GCGAATTTTC ATGATGCGCT TCCGCATAGC TTTGTTGATC CTGAATTACC ACGCCTAATG
GAGTCGAGTC TGCAGCAGGT CAGTCAGAGA CTTGAGTCTA TCCAAGCTGA AAGCGAGAAA
GTTATCCAAC GCTTTAAAAA CTTACATCAG TTTTTCTCAT AA
 
Protein sequence
MTQTLFASNA EKALLSERIN KLAKALTDGV YEREHTIKLC LLAALAGESV FLLGPPGIAK 
SLIAKRLIQA FDNSSYFEYL MTRFSTPEEV FGPLSIQELK DNGRYVRLTK GYLPTAQVVF
LDEIWKAGPA ILNTLLTVVN EKTFKNGSDI ERVPMRLLVS ASNELPDEDS GLDALYDRML
VRVFVNRIQN KQNFKSMLTV GTSQEAQVPE GLAITDEEYH QWQQQLDKLT LTDNAFEKLF
QLKTMLESKV EAQFGDVANT DMYVSDRRWK KAVKLLKASA FFNGRDEINP LDLLLLQDCL
WNSPESRDVV REVVQEFALK HAFDQQDAEQ EIEYCRESLV DVQHELEDAY RMTLTSEAAT
GILRKETMRF DTSKAKTYKV GAAVNLVKLV ILQSNMSVSE SEKGDSRWVY VPKDELDRVI
KEGHGDVYGY VNQNTNMCRL RFDVDAANNL VIRDIANRGI LVSLVTQEGL DVELYQKWLT
QSEKAVNQLS EAEHHMRKVK ANFHDALPHS FVDPELPRLM ESSLQQVSQR LESIQAESEK
VIQRFKNLHQ FFS