Gene VEA_000047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000047 
Symbol 
ID8558346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp51004 
End bp51648 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID646407706 
ProductADP-ribose pyrophosphatase 
Protein accessionYP_003287200 
Protein GI262395347 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.911513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATACA GCTCACTGAA AGTGCAAACG CTTTCGTTGT GTTGCAACAT TTTTTGCTTT 
TGTTTCCCAC CATTTGTGGT TAATGTCGAA AAACGTCAAA ATGCGGTAAC AGCTAGGGTT 
AATAACTGCA TGAGCAAAAT AATTCATAAA TGGAAGCAAA TTTCTCTGAT TGAAGAAGAG 
GTTATGCTTC CTACAGGACA GGCAATTACG CACACCACAA TCCATCATCC GGGCGCTGCG 
GTGATTCTCC CTATTACAAC GGAAGGAGAG ATAGTCCTTG TCCATCAATT TCGCCCTTCA 
CTTAATAAAT GGCTTTTGGA GCTTCCTGCT GGTACAAGAG AAGGCAATGA AAACCCTCTC 
TGTTGCGCGA AAAGAGAGCT AGAGGAAGAA ACGGGCTATA GTGCAGAAAA ATTTACCTCT 
CTCGGCCAAG TCACTCCCCT TGCCGGATTT TGTGATGAGA TACAGTACCT ATTTGTTGCA 
GAGAAGCTCA GCCAAACCAA CCGTTACGAA TGTGATGAAG ATGAAGTGAT TGAGGTTGTT 
ACCTTGTCAC TCCAACAACT CGAAGACAAG ATTATTGATG GCACAATTAC CGATGCCAAA 
ACGATCGCTT GTTTAAGCAA AGCGCGCCTT TGCGGATATA TTTAG
 
Protein sequence
MRYSSLKVQT LSLCCNIFCF CFPPFVVNVE KRQNAVTARV NNCMSKIIHK WKQISLIEEE 
VMLPTGQAIT HTTIHHPGAA VILPITTEGE IVLVHQFRPS LNKWLLELPA GTREGNENPL 
CCAKRELEEE TGYSAEKFTS LGQVTPLAGF CDEIQYLFVA EKLSQTNRYE CDEDEVIEVV 
TLSLQQLEDK IIDGTITDAK TIACLSKARL CGYI