Gene VEA_000042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000042 
Symbol 
ID8558341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp46004 
End bp46537 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID646407701 
Productlipoprotein Blc 
Protein accessionYP_003287195 
Protein GI262395342 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGC TAAAAACATT ATTACTTTTA TCACTTGTTA CTTTATTTGG CTGTACCTCT 
AAACCTGATG GGGTACAGCC AGTTAACAAT TTTGATTTAG AGTCTTATCT AGGCAAGTGG
TACGAAATCG CACGGCTCGA TCATTCGTTT GAGCGTGGTC TATCCAACGT TACGGCCGAG
TATCGGCTTC GTGAGGATGG TGGGGTTAAG GTGACAAACC GCGGGTATTC AGAAGAAGAT
CAGCAGTGGT CAGAAGCTGA AGGTAAAGCT TATTTTGTTG AAGACGAAAC GGTTGGGCAC
TTAAAAGTCT CCTTTTTTGG GCCAATCTAT TCTTCTTACA TTGTGTTTGA GCTAGTTGAA
AACTATGACT ATGCGTTTGT CTCAGGTTAC AACCACGACT ACTTGTGGCT ATTGTCTAGA
ACCCCCAACG TTGATGAGAA AATCCTGGAG CGTTTTAAGC AGGTTGCTAA AGAGAAAGGT
TTCGCGTTAG ATGAGCTAAT TCTCGTTGAT CAAGAGAGTG GACGACAGTT TTAA
 
Protein sequence
MKSLKTLLLL SLVTLFGCTS KPDGVQPVNN FDLESYLGKW YEIARLDHSF ERGLSNVTAE 
YRLREDGGVK VTNRGYSEED QQWSEAEGKA YFVEDETVGH LKVSFFGPIY SSYIVFELVE
NYDYAFVSGY NHDYLWLLSR TPNVDEKILE RFKQVAKEKG FALDELILVD QESGRQF