| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000028 |
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| Symbol | |
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| ID | 8558326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 30056 |
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| End bp | 30535 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646407686 |
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| Product | hemolysin-coregulated protein |
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| Protein accession | YP_003287180 |
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| Protein GI | 262395327 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTCTA ATACGTATCT TAAATACGCA GATATTAAGG GTGAGGCAAC TGCCGAGCAA
TATAAAGATT TGATTACACT ACTATCTGTA GATTGGAGTG TAGGTCGTGA GATCTCATCA
TACACTGGTA CAGCGATGGA CCGTGAAGCG AGCGCTACTC GTCTATATGA TTTGACTATC
ACTAAACTTC AAGACCGTTC TTCTCCTGAC TTATTTAAAG AAGCGACAAT TGGTAAAGGT
AAACCTGCGG TTTTCCATAT TACTAAGCAG GGTGAGAAAG TTGAAGAAAT CATGAAGATC
GAACTGACTG ATGCGATGAT TTCTAACTAC TCAGTTTCTA TCCAGGATGA TCGTCCAGTT
GAAACCATCA CTATTTCTTA CACTGAAATG ATGATGACAG TGACTCCTAC TGACGATAAA
AACAACACTT CTGCGCCATT GGTATACGGC TACAGCGGTG TTAAAGGTCA ACAAATGTAA
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| Protein sequence | MQSNTYLKYA DIKGEATAEQ YKDLITLLSV DWSVGREISS YTGTAMDREA SATRLYDLTI
TKLQDRSSPD LFKEATIGKG KPAVFHITKQ GEKVEEIMKI ELTDAMISNY SVSIQDDRPV
ETITISYTEM MMTVTPTDDK NNTSAPLVYG YSGVKGQQM
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