Gene VEA_000004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000004 
Symbol 
ID8558302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp2130 
End bp2705 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content44% 
IMG OID646407662 
Producttranscriptional regulator 
Protein accessionYP_003287156 
Protein GI262395303 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA AAGCCAACTT CGATCGAGAA GAAAAACTAT TAGTCGCTAT GGACGTTTTT 
TGGCGCAAAG GTTTCGCTAA TACATCCATT TCTGATCTCA CCGACGAGTT GAACATCAAC 
CGCTTCAGTC TTTACAACAC CTACGGTGAC AAGCAACAGC TCTACTACGA AGCGCTCGAT 
ACTTACTTGA AAAAAATCTC GCTACCCTCA CTGAATGATT TGGAAAAAGA CGATGCGTCT 
TTACCCGAGT TGGAATCGTT CCTTAAATCT TTTGCTGAGC TGCAGCGCAA ACGCAACTGT 
GGGTGTTTTA TTCAAAATGC GTTGATTGAG CATGCAGGTG AAGACGATGA CGTACTGCGC 
AAAGGGCATT TTTTGTTCGA CCATCTTATC GACATCATTG CGGATGCGCT GACCAATGCG 
CAAAAAGAAA CCTTAGTACC GAAAACGCTT AAACCAGAAG AGCTTGCTCG TTTTGTTCTC 
AACAACATGC AAGGCATGCG CGTACTTGGC AAAGCCAAAC GTTATGCCGA TTTGGATACG 
GCGCTTTCCT GCTTGCTGGT TTTGATTAGG AAATAA
 
Protein sequence
MARKANFDRE EKLLVAMDVF WRKGFANTSI SDLTDELNIN RFSLYNTYGD KQQLYYEALD 
TYLKKISLPS LNDLEKDDAS LPELESFLKS FAELQRKRNC GCFIQNALIE HAGEDDDVLR 
KGHFLFDHLI DIIADALTNA QKETLVPKTL KPEELARFVL NNMQGMRVLG KAKRYADLDT 
ALSCLLVLIR K