| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2864 |
|---|
| Symbol | imp |
|---|
| ID | 5137875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 3016952 |
|---|
| End bp | 3019315 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640534308 |
|---|
| Product | organic solvent tolerance protein |
|---|
| Protein accession | YP_001218714 |
|---|
| Protein GI | 147675099 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1452] Organic solvent tolerance protein OstA |
|---|
| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000318031 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAACC CCATGTCATG CTTTTCCCGC ACGTTTTTAG CCGCTTCGAT TAGCGCTGCA
CTCTTTGCAC CTCAGATACA AGCAGAAGCA AGTGTGGATG ACAATCGCGC TCAATTACCT
AATGGTGAGC AGTGTTTAGT CAACCAGCCT GAGCCTACTA ATCCCGGCCA ACAGCCTATC
AATGTCGAAG CGGATAAGCT AGAGGCAATC AATGGGCAGA AGGCGACCTA TTCGGGGAAT
GTCGTTGTCG TGCAAGGTAA GAAACGCATT GCCGCGGATA ACGTGACTTT GCATCAGCAA
GAGAATGTGG TTGTCGCTGA AGGTAATGTT CAGTTCAGTG ATGGTGAGAT AAAAACACAC
TCCACCAAAG CGACCAACCA TCTCAATACC GATGAAATGA CGCTGGAAAA TACTCGCTAC
CAGTTTTTGT GTGAACCGGG CCGTGGTGAA GCGGTGTATG TTTCGAAAAC GGGCAAAGCC
GTGTATGAAA TTGAAGATGG CTCCATCACC TCATGTCCTG ATGGTGATAA TGCATGGCGG
ATGCGTGCTT CCAGCATTGA TGTGGATCAG AATGAAGAGA TTGCGACCTT CTACAATCCG
CGTCTTGAAG TGCAAAACGT ACCTGTGTTC TATCTCCCCT ATTTGACTGT GCCAATCGGT
GATACGCGTA AAACTGGTTT TCTATACCCG ACGGCCTCTT ACGGCTCACG AAATGGCTAT
TCGTTTGAAG TGCCAATTTA TTGGAACTTG GCACCCCAAT ATGACTTAGA AACCACCTTT
AACTATATGC AAAAGCGCGG AACACAACTG AATAGTGTGT TCCGTTATCT GACCGATTTT
GGTGCGGGTC AAATCAAATC TGAATATCTT GCCGACGATC AGCTGCACAC TGAATTAGGC
GATCGCTGGG CATTCCAATA TGAGCATAAC GGCATTTTCC AACAAGCTTG GAAATTTGAA
ATCGACTACT CCAAAGTCAG CGATATCAAC TATTTCTCTG ACTTAGATTC GGGAGTCGGT
AATCGTGAAG ATGGACAACT CATCCAAGAA GGGCGTGCCA CTTACCGTAG CGACAACTGG
GATTCTGCGC TGTTGGTGCG GGATTTCCAA CTACTGACCA AGGATACCAC TAGCACGAAC
TTGCCTTATC GGTTAATGCC CCAGCTCAGC TACAACTACT ATGCTCCAGA GACGATGAAG
TATCTGGATC TTGACCTTGT CAGCCATGTC TCGCGCTTTG AAACCGATGC AAGAGGCAAA
CCCTCTGCAA CTCGAGTACA TATTGAACCT GGGCTCAAAA TTCCGTTCAG CAACACTTGG
GGCAACTGGA CAACCGAAGC ACGTGTCTTG GGCACCTACT ATCAACAAGA TCTTGATAAG
ACCACAGATG CCAAACTGGA AGAGAGTGTG ACACGCGTTA TCCCTGAGAT TCGCAGTGTA
GCGGGCATTG TGCTTGAACG AGATACGGTA CTGCTTGATG ACTACACTCA AACCCTTGAA
CCCAAAATTC AATATCTCTA CGTGCCAGAA AAATATCAGG ACAATATTGG TCTGTATGAT
TCCACTTTGC TGCAAACCGA CTACTACGGG CTATTCCGCA GTCGCAAATA CAGCGGCGTA
GACCGAATTG AGTCCGCCAA CCAAGTCAGC TACGGTGCAT CGACTCGTTT CTTTGATAGC
AACTATAAAG AGCGCCTCAA TATCGCGTTT GGTCAGATTT TCTATCTGGA CAGCAAGCTC
AATCCGTCCA ATAAAAATCC AGACAGCACA TCGGATAAAA CCAGCTATTC CGCTTGGGCC
GTTGAGATGG ACTTTAACTT TGCTGACTAT CTGTTCTATC ACGGCGGCAT TCAATACGAC
ATCGATAGCC AAGCCGTTCA ACTTGGCAAC AGTACATTAG AATATCGAGT CGCCAGCGGT
TATATTCAAG CTAACTACCG CTATGTTGCT AAGGATTATA TTCGCAATAC CGTCGGTGAC
AGCATTACCA ATATTGATGA CATTACCCGA GACGGTATTT CACAAGCGGG CATTTTGGCG
GGTTACCAGT TGAGTCGTAA ATGGTCGGCT AGCGGTCAAT ATTACTATGA CCTGACCACA
GACGAGGCGT TAGAGTGGCT GGCTAACCTG ACTTACACTT CAGATTGTTG GTATGTGGGC
TTTACTTACA GTAACCAATT AAAAAGCTGG AATGGCAACT TTGTTACGGA TCCTTACGCG
ACTCCGATTT ATGAGAATAA CTTCAGCTTT AACATCGGGA TTATTGGTTT TGGCACCAGC
ATTGGCGCAG GCTCAAGCAT GACAGGTGTC GATAGCGCAG GTAACTCACT CGGTTATGGT
CGCCCATTCT TCCTGAATAA CTAA
|
|---|
| Protein sequence | MYNPMSCFSR TFLAASISAA LFAPQIQAEA SVDDNRAQLP NGEQCLVNQP EPTNPGQQPI
NVEADKLEAI NGQKATYSGN VVVVQGKKRI AADNVTLHQQ ENVVVAEGNV QFSDGEIKTH
STKATNHLNT DEMTLENTRY QFLCEPGRGE AVYVSKTGKA VYEIEDGSIT SCPDGDNAWR
MRASSIDVDQ NEEIATFYNP RLEVQNVPVF YLPYLTVPIG DTRKTGFLYP TASYGSRNGY
SFEVPIYWNL APQYDLETTF NYMQKRGTQL NSVFRYLTDF GAGQIKSEYL ADDQLHTELG
DRWAFQYEHN GIFQQAWKFE IDYSKVSDIN YFSDLDSGVG NREDGQLIQE GRATYRSDNW
DSALLVRDFQ LLTKDTTSTN LPYRLMPQLS YNYYAPETMK YLDLDLVSHV SRFETDARGK
PSATRVHIEP GLKIPFSNTW GNWTTEARVL GTYYQQDLDK TTDAKLEESV TRVIPEIRSV
AGIVLERDTV LLDDYTQTLE PKIQYLYVPE KYQDNIGLYD STLLQTDYYG LFRSRKYSGV
DRIESANQVS YGASTRFFDS NYKERLNIAF GQIFYLDSKL NPSNKNPDST SDKTSYSAWA
VEMDFNFADY LFYHGGIQYD IDSQAVQLGN STLEYRVASG YIQANYRYVA KDYIRNTVGD
SITNIDDITR DGISQAGILA GYQLSRKWSA SGQYYYDLTT DEALEWLANL TYTSDCWYVG
FTYSNQLKSW NGNFVTDPYA TPIYENNFSF NIGIIGFGTS IGAGSSMTGV DSAGNSLGYG
RPFFLNN
|
|---|
| |